RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ACP7Q6ZNF0 438 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 OCC1Q8TAD7 63 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 NPIPB3Q92617 1050 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 RNF2Q99496 336 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 NABP2Q9BQ15 211 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 TMEM250H0YL14 139 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 RAB29O14966 203 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 IGKV1D-33P01593 117 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 IGKV1-33P01594 117 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 GCHFRP30047 84 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 CD81P60033 236 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 GFRALQ6UXV0 394 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 LINC00596Q86U02 117 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 VPS25Q9BRG1 176 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 SPRR3Q9UBC9 169 aa11.13□□□□□ -0.63
CASC4-201ENST00000299957 FAM90A27PA6NNH2 459 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 J3KRW8 73 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 CYC1P08574 325 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 IL6RP08887 468 aaPredicted RBP11.12□□□□□ -0.63
CASC4-201ENST00000299957 RND2P52198 227 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 GFRA1P56159 465 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 ZNF585BQ52M93 769 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 ONECUT1Q9UBC0 465 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 WASHC3Q9Y3C0 194 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 SNAI2O43623 268 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 SERF1AO75920 110 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 RAB7AP51149 207 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 RNFT1Q5M7Z0 435 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 C9orf106Q8NAJ2 232 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 ZBTB34Q8NCN2 500 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 IL19Q9UHD0 177 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 SONP18583 2426 aaKnown RBP11.12□□□□□ -0.63
CASC4-201ENST00000299957 LY6G6EA0A0G2JKS1 128 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 IGKV1-39P01597 117 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 IGKV1D-39P04432 117 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 ZNF497Q6ZNH5 498 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 FAM222BQ8WU58 562 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 U3KQA8 63 aa11.12□□□□□ -0.63
CASC4-201ENST00000299957 ZNF106Q9H2Y7 1883 aaKnown RBP11.12□□□□□ -0.63
CASC4-201ENST00000299957 BMPR1BO00238 502 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 FOLR2P14207 255 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 CCL3L1P16619 93 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 HTR1DP28221 377 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 GNB2P62879 340 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 LRRC10Q5BKY1 277 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 C10orf55Q5SWW7 151 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 PDPNQ86YL7 162 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 SSBP4Q9BWG4 385 aaPredicted RBP11.11□□□□□ -0.63
CASC4-201ENST00000299957 CHD8Q9HCK8 2581 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 IGKV3-7A0A075B6H7 116 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 CT45A10P0DMU9 189 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 TNFRSF1AP19438 455 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 LGALS4P56470 323 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 LEMD1Q68G75 181 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 SEPSECSQ9HD40 501 aaKnown RBP11.11□□□□□ -0.63
CASC4-201ENST00000299957 A0A087WWC5 75 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 LOC389332A0A1B0GUA5 103 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 APCSP02743 223 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 COL8A1P27658 744 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 CD82P27701 267 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 HSPE1P61604 102 aaKnown RBP11.11□□□□□ -0.63
CASC4-201ENST00000299957 PRSS8Q16651 343 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 TGIF2LYQ8IUE0 185 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 PMCHL2Q9BQD1 86 aa11.11□□□□□ -0.63
CASC4-201ENST00000299957 PGPA6NDG6 321 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 FOXH1O75593 365 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 ARSJQ5FYB0 599 aaPredicted RBP11.1□□□□□ -0.63
CASC4-201ENST00000299957 SSX8Q7RTT4 187 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 OR10W1Q8NGF6 305 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 NEU1Q99519 415 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 TMEM167BQ9NRX6 74 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 TIMM9Q9Y5J7 89 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 TMEM210A6NLX4 147 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 M0R296 226 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 BRS3P32247 399 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 ADMP35318 185 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 VMA21Q3ZAQ7 101 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 C10orf113Q5VZT2 155 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 WDR82Q6UXN9 313 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 LINC00470Q9BZP3 86 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 SLC25A10Q9UBX3 287 aaPredicted RBP11.1□□□□□ -0.63
CASC4-201ENST00000299957 EML5Q05BV3 1969 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 COX5BP10606 129 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 TMEM108Q6UXF1 575 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 OR9G1Q8NH87 305 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 OR2T6Q8NHC8 308 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 RPEQ96AT9 228 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 PAXXQ9BUH6 204 aa11.1□□□□□ -0.63
CASC4-201ENST00000299957 OR4A47Q6IF82 309 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 FGF23Q9GZV9 251 aaPredicted RBP11.09□□□□□ -0.63
CASC4-201ENST00000299957 TRAV5A0A0B4J249 113 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 GABRA6Q16445 453 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 SPATA45Q537H7 98 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 UNQ6494/PRO21346Q6UXR6 183 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 Q6ZT83 130 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 ZNF596Q8TC21 504 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 TMEM45BQ96B21 275 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 ASCL3Q9NQ33 180 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms