RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 Q0VG73 95 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 RAB1CQ92928 201 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 LEAP2Q969E1 77 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 SGK494Q96LW2 274 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 TRIB1Q96RU8 372 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 KMT2EQ8IZD2 1858 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 TRBV9A0A0B4J1U6 114 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 YPEL1O60688 119 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 LYZL6O75951 148 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 CA2P00918 260 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 AMY1AP04745 511 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 PRRX1P54821 245 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 UBE2V1Q13404 147 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 FBLN7Q53RD9 439 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 YPEL2Q96QA6 119 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 SSBP4Q9BWG4 385 aaPredicted RBP9.49□□□□□ -0.89
TRUB1-201ENST00000298746 CLEC7AQ9BXN2 247 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 ZNF355PQ9NSJ1 428 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 ABI3Q9P2A4 366 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 TCF19Q9Y242 345 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 SELENOKQ9Y6D0 94 aa9.49□□□□□ -0.89
TRUB1-201ENST00000298746 TNFSF4P23510 183 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 FBXW9Q5XUX1 488 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 OR2D3Q8NGH3 330 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 POLEQ07864 2286 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 TRAV9-1A0A075B6T8 112 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 FOXF2Q12947 444 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 WDR86Q86TI4 376 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 OR2T6Q8NHC8 308 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 TMEM167BQ9NRX6 74 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 MBNL3Q9NUK0 354 aaKnown RBP9.48□□□□□ -0.89
TRUB1-201ENST00000298746 TMEM140Q9NV12 185 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 WDFY3Q8IZQ1 3526 aa9.48□□□□□ -0.89
TRUB1-201ENST00000298746 APOA2P02652 100 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 OR4A47Q6IF82 309 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 CNEP1R1Q8N9A8 125 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 OR2M7Q8NG81 312 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 ORAOV1Q8WV07 137 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 C5orf30Q96GV9 206 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 OR8B2Q96RD0 313 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 GAL3ST2Q9H3Q3 398 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 CDC42EP3Q9UKI2 254 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 C10orf142B7Z368 130 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 RPL8P62917 257 aaKnown RBP9.47□□□□□ -0.89
TRUB1-201ENST00000298746 CX3CL1P78423 397 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 LDLRAD2Q5SZI1 272 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 DCAF12Q5T6F0 453 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 C19orf35Q6ZS72 473 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 TSKUQ8WUA8 353 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 TECRQ9NZ01 308 aaKnown RBP9.47□□□□□ -0.89
TRUB1-201ENST00000298746 DUSP13Q9UII6 198 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 COX11Q9Y6N1 276 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 V9GYV3 84 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 NKX6-3A6NJ46 265 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 M0QZ24 198 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 BMPR1BO00238 502 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 NDUFB8O95169 186 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 FOXA3P55318 350 aaPredicted RBP9.47□□□□□ -0.89
TRUB1-201ENST00000298746 TAS2R45P59539 299 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 UBE2L3P68036 154 aaKnown RBP9.47□□□□□ -0.89
TRUB1-201ENST00000298746 TNXAQ16473 311 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 TMEM45BQ96B21 275 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 NABP2Q9BQ15 211 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 CLEC5AQ9NY25 188 aa9.47□□□□□ -0.89
TRUB1-201ENST00000298746 NUDT3O95989 172 aa9.46□□□□□ -0.89
TRUB1-201ENST00000298746 NRN1LQ496H8 165 aa9.46□□□□□ -0.89
TRUB1-201ENST00000298746 OR10J3Q5JRS4 329 aa9.46□□□□□ -0.89
TRUB1-201ENST00000298746 LOXL4Q96JB6 756 aa9.46□□□□□ -0.89
TRUB1-201ENST00000298746 AP1S3Q96PC3 154 aa9.46□□□□□ -0.89
TRUB1-201ENST00000298746 FAM173AQ9BQD7 235 aa9.46□□□□□ -0.89
TRUB1-201ENST00000298746 LINC00470Q9BZP3 86 aa9.46□□□□□ -0.89
TRUB1-201ENST00000298746 METRNQ9UJH8 293 aa9.46□□□□□ -0.89
TRUB1-201ENST00000298746 KIAA1549Q9HCM3 1950 aa9.46□□□□□ -0.89
TRUB1-201ENST00000298746 UBE2G1P62253 170 aa9.46□□□□□ -0.9
TRUB1-201ENST00000298746 COX19Q49B96 90 aa9.46□□□□□ -0.9
TRUB1-201ENST00000298746 TMEM136Q6ZRR5 245 aa9.46□□□□□ -0.9
TRUB1-201ENST00000298746 LYG1Q8N1E2 194 aa9.46□□□□□ -0.9
TRUB1-201ENST00000298746 YLPM1P49750 1951 aaKnown RBP9.46□□□□□ -0.9
TRUB1-201ENST00000298746 MED13Q9UHV7 2174 aa9.46□□□□□ -0.9
TRUB1-201ENST00000298746 TRGV10A0A0A0MS01 117 aa9.46□□□□□ -0.9
TRUB1-201ENST00000298746 COMPP49747 757 aaPredicted RBP9.46□□□□□ -0.9
TRUB1-201ENST00000298746 SMIM21Q3B7S5 101 aa9.46□□□□□ -0.9
TRUB1-201ENST00000298746 CORO2AQ92828 525 aa9.46□□□□□ -0.9
TRUB1-201ENST00000298746 LINC00479Q96M42 142 aa9.46□□□□□ -0.9
TRUB1-201ENST00000298746 UBE2ZQ9H832 354 aaPredicted RBP9.46□□□□□ -0.9
TRUB1-201ENST00000298746 MYOD1P15172 320 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 BRWD1-AS2P59051 145 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 ZNF146Q15072 292 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 SPEM1Q8N4L4 309 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 SFXN3Q9BWM7 321 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 PKDREJQ9NTG1 2253 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 GFRA3O60609 400 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 AGFG2O95081 481 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 CLDN18P56856 261 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 Q0VFX4 171 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 MPV17L2Q567V2 206 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 SLC35E4Q6ICL7 350 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 PPP1R32Q7Z5V6 425 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 MOB3BQ86TA1 216 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms