RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 IGKV1-33P01594 117 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 CD24P25063 80 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 F2RL1P55085 397 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 PRSS8Q16651 343 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 POLQO75417 2590 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 MMD2Q8IY49 270 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 AJUBAQ96IF1 538 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 RSG1Q9BU20 258 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 PLXNB1O43157 2135 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 CENPVL3A0A0U1RRI6 287 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 MFSD2BA6NFX1 497 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 PRSS46E5RG02 174 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 MOSP00540 346 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 IFNA4P05014 189 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 MSMBP08118 114 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 SAA4P35542 130 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 HNF4GQ14541 408 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 VWC2Q2TAL6 325 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 DEFB113Q30KQ7 82 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 PXDC1Q5TGL8 231 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 TAF15Q92804 592 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTX3-201ENST00000295927 MALSU1Q96EH3 234 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 FBXL15Q9H469 300 aa18.31■□□□□ 0.52
PTX3-201ENST00000295927 RAB5CP51148 216 aa18.3■□□□□ 0.52
PTX3-201ENST00000295927 BLOC1S1P78537 153 aa18.3■□□□□ 0.52
PTX3-201ENST00000295927 Q6ZRG5 221 aa18.3■□□□□ 0.52
PTX3-201ENST00000295927 PPP1R27Q86WC6 154 aa18.3■□□□□ 0.52
PTX3-201ENST00000295927 EAF1Q96JC9 268 aaPredicted RBP18.3■□□□□ 0.52
PTX3-201ENST00000295927 CSMD2Q7Z408 3487 aa18.3■□□□□ 0.52
PTX3-201ENST00000295927 A0A1B0GW64 132 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 SNRNP70P08621 437 aaKnown RBP18.29■□□□□ 0.52
PTX3-201ENST00000295927 AANATQ16613 207 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 HIST2H2BCQ6DN03 193 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 PARP11Q9NR21 331 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 A0A096LNT2 108 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 A0A1W2PN81 502 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 INS-IGF2F8WCM5 200 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 NPFFO15130 113 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 PRH1P02810 166 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 CHRNA7P36544 502 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 FHITP49789 147 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 HES1Q14469 280 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 MMDQ15546 238 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 TNXAQ16473 311 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 BSXQ3C1V8 233 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 FBLN7Q53RD9 439 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 FBXO7Q9Y3I1 522 aa18.29■□□□□ 0.52
PTX3-201ENST00000295927 ANKRD34BA5PLL1 514 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 B4DSR2 109 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 UMAD1C9J7I0 102 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 CAMLGP49069 296 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 ERHP84090 104 aaKnown RBP18.28■□□□□ 0.52
PTX3-201ENST00000295927 PIP4P2Q8N4L2 257 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 OR2T10Q8NGZ9 312 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 GGACTQ9BVM4 153 aa18.28■□□□□ 0.52
PTX3-201ENST00000295927 TRIM77I1YAP6 450 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 ACTL6BO94805 426 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 RNASE2P10153 161 aaKnown RBP18.27■□□□□ 0.52
PTX3-201ENST00000295927 MAS1LP35410 378 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 SNCAP37840 140 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 WT1-ASQ06250 92 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 TUSC1Q2TAM9 212 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 LRRC75A-AS1Q8N1F1 130 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 PSMG3Q9BT73 122 aaPredicted RBP18.27■□□□□ 0.52
PTX3-201ENST00000295927 HRH4Q9H3N8 390 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 ABCA12Q86UK0 2595 aa18.27■□□□□ 0.52
PTX3-201ENST00000295927 NBR2O15453 112 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 MDKP21741 143 aaPredicted RBP18.27■□□□□ 0.51
PTX3-201ENST00000295927 FGF7P21781 194 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 RPL27AP46776 148 aaKnown RBP18.27■□□□□ 0.51
PTX3-201ENST00000295927 ATP5IP56385 69 aaPredicted RBP18.27■□□□□ 0.51
PTX3-201ENST00000295927 DLK1P80370 383 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 PLGLAQ15195 96 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 C2orf83Q53S99 150 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 HSD17B13Q7Z5P4 300 aaPredicted RBP18.27■□□□□ 0.51
PTX3-201ENST00000295927 NPBQ8NG41 125 aa18.27■□□□□ 0.51
PTX3-201ENST00000295927 FCN1O00602 326 aa18.26■□□□□ 0.51
PTX3-201ENST00000295927 COMPP49747 757 aaPredicted RBP18.26■□□□□ 0.51
PTX3-201ENST00000295927 GNB1P62873 340 aa18.26■□□□□ 0.51
PTX3-201ENST00000295927 BTNL8Q6UX41 500 aa18.26■□□□□ 0.51
PTX3-201ENST00000295927 FAM213BQ8TBF2 198 aa18.26■□□□□ 0.51
PTX3-201ENST00000295927 C1orf159Q96HA4 380 aa18.26■□□□□ 0.51
PTX3-201ENST00000295927 MAP1AP78559 2803 aaPredicted RBP18.26■□□□□ 0.51
PTX3-201ENST00000295927 HELZ2Q9BYK8 2649 aaKnown RBP18.26■□□□□ 0.51
PTX3-201ENST00000295927 NDUFA3O95167 84 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 ZNF616Q08AN1 781 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 EBI3Q14213 229 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 AKR1C8PQ5T2L2 129 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 MARC2Q969Z3 335 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 KIAA1456Q9P272 454 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 IGHV1-69DA0A0B4J2H0 117 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 IGHV1-69P01742 117 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 EIF4E3Q8N5X7 224 aaKnown RBP18.25■□□□□ 0.51
PTX3-201ENST00000295927 HIF1ANQ9NWT6 349 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 WDR83OSQ9Y284 106 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 TIMM9Q9Y5J7 89 aa18.25■□□□□ 0.51
PTX3-201ENST00000295927 IGHV3OR16-10A0A075B7F0 116 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 SMCO3A2RU48 225 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 OR13C7P0DN81 318 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 SSBP2P81877 361 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms