RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ATG101Q9BSB4 218 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 ZNF383Q8NA42 475 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 TNFRSF14Q92956 283 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 NABP1Q96AH0 204 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 GALNT14Q96FL9 552 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 MED12Q93074 2177 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 MEF2BQ02080 365 aaPredicted RBP14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 RAB24Q969Q5 203 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 IGKV1-9A0A0C4DH69 117 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 LY6G6EA0A0G2JKS1 128 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 SRRM5B3KS81 715 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 B4DSR2 109 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 OR10S1Q8NGN2 331 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 U3KQA8 63 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 TRBV6-7A0A0A0MS04 114 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 A0A1W2PRX2 142 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 NDUFB4O95168 129 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 SRSF9Q13242 221 aaKnown RBP eCLIP14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 NPIPB6E9PJ23 425 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 RPS20P60866 119 aaKnown RBP14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 TWIST1Q15672 202 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 IGFL3Q6UXB1 125 aa14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 AURKAIP1Q9NWT8 199 aaPredicted RBP14.83□□□□□ -0.04
CDC42EP3-201ENST00000295324 MUC6Q6W4X9 2439 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 IGHV3OR16-13A0A075B7E8 117 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 IGHV3-74A0A0B4J1X5 117 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 B3GALT5-AS1P59052 145 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 TRAV40A0A0B4J280 105 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 IGKV3-15P01624 115 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 ZNF880Q6PDB4 577 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 GGACTQ9BVM4 153 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 ZNF319Q9P2F9 582 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 PEMTQ9UBM1 199 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 C7orf77A4D0Y5 90 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 RNF224P0DH78 156 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 FUT9Q9Y231 359 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 ZNF497Q6ZNH5 498 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 CYP2G1PQ6ZSU1 146 aa14.82□□□□□ -0.04
CDC42EP3-201ENST00000295324 MSGN1A6NI15 193 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 PHLDA3Q9Y5J5 127 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 GPR183P32249 361 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 MFAP2P55001 183 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 SAA2-SAA4A0A096LPE2 208 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 SAA2P0DJI9 122 aaPredicted RBP14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 PKIAP61925 76 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 MORN2Q502X0 79 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 AMMECR1LQ6DCA0 310 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 PIP4P1Q86T03 277 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 IGHV3-23P01764 117 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 CD99P14209 185 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 CX3CL1P78423 397 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 SNURFLB1AK76 121 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 C1QTNF9BB2RNN3 333 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 C1QTNF9P0C862 333 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 CXCL2P19875 107 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 DLX1P56177 255 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 HIST1H1AQ02539 215 aaPredicted RBP14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 HSPB8Q9UJY1 196 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 HEATR5BQ9P2D3 2071 aa14.81□□□□□ -0.04
CDC42EP3-201ENST00000295324 PLXNA3P51805 1871 aa14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 IER3P46695 156 aa14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 FAM166AQ6J272 317 aa14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 CLDND2Q8NHS1 167 aa14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 MYOZ3Q8TDC0 251 aa14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 FOXA2Q9Y261 457 aaPredicted RBP14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 FAM209BQ5JX69 171 aa14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 RNASEH2CQ8TDP1 164 aaKnown RBP14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 CACNG8Q8WXS5 425 aa14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 TRAV24A0A0B4J272 114 aa14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 UBE2L6O14933 153 aa14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 IBA57Q5T440 356 aaKnown RBP14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 C8orf46Q8TAG6 207 aa14.8□□□□□ -0.04
CDC42EP3-201ENST00000295324 APCSP02743 223 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 KIF26BQ2KJY2 2108 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 C1QL1O75973 258 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 ARL14EPLP0DKL9 152 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 MYOD1P15172 320 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 SP5Q6BEB4 398 aaPredicted RBP14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 SGMS2Q8NHU3 365 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 SPSB4Q96A44 273 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 TMEM178BH3BS89 294 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 IGKV3-20P01619 116 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 IGHV3-11P01762 117 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 WNT2P09544 360 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 RELBQ01201 579 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 ZNF343Q6P1L6 599 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 CLEC19AQ6UXS0 136 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 DTX1Q86Y01 620 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 S4R3C0 116 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 SLC25A16P16260 332 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 LINC00305Q7Z4B0 112 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 FAM169BQ8N8A8 192 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 CYB561D1Q8N8Q1 229 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 WNT10AQ9GZT5 417 aa14.79□□□□□ -0.04
CDC42EP3-201ENST00000295324 IGHV3-49A0A0A0MS15 119 aa14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 SAA1P0DJI8 122 aaPredicted RBP14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 CYB5R2Q6BCY4 276 aa14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 ZNF474Q6S9Z5 364 aaPredicted RBP14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 PAQR4Q8N4S7 273 aaPredicted RBP14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 IFITM10A6NMD0 228 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms