RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 LCN2P80188 198 aa13.46□□□□□ -0.26
HIF3A-203ENST00000291300 SEC11CQ9BY50 192 aa13.46□□□□□ -0.26
HIF3A-203ENST00000291300 ENY2Q9NPA8 101 aa13.46□□□□□ -0.26
HIF3A-203ENST00000291300 NDUFA4L2Q9NRX3 87 aa13.46□□□□□ -0.26
HIF3A-203ENST00000291300 TIMM9Q9Y5J7 89 aa13.46□□□□□ -0.26
HIF3A-203ENST00000291300 INSIG2Q9Y5U4 225 aa13.46□□□□□ -0.26
HIF3A-203ENST00000291300 CSMD2Q7Z408 3487 aa13.46□□□□□ -0.26
HIF3A-203ENST00000291300 A0A1W2PPI3 338 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 FAM74A7A6NL05 159 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 IGHV2-5P01817 119 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 NPBWR1P48145 328 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 RPP30P78346 268 aaKnown RBP13.45□□□□□ -0.26
HIF3A-203ENST00000291300 TLE4Q04727 773 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 SRSF1Q07955 248 aaKnown RBP eCLIP13.45□□□□□ -0.26
HIF3A-203ENST00000291300 FAM74A3Q4VXF1 159 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 FFAR4Q5NUL3 377 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 DPPA3Q6W0C5 159 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 SPG11Q96JI7 2443 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 MC5RP33032 325 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 MGST2Q99735 147 aa13.45□□□□□ -0.26
HIF3A-203ENST00000291300 RBFOX3A6NFN3 312 aa13.44□□□□□ -0.26
HIF3A-203ENST00000291300 RNASE2P10153 161 aaKnown RBP13.44□□□□□ -0.26
HIF3A-203ENST00000291300 USF1P22415 310 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-203ENST00000291300 RAB13P51153 203 aa13.44□□□□□ -0.26
HIF3A-203ENST00000291300 OR5B3Q8NH48 314 aa13.44□□□□□ -0.26
HIF3A-203ENST00000291300 CLDND2Q8NHS1 167 aa13.44□□□□□ -0.26
HIF3A-203ENST00000291300 C17orf50Q8WW18 174 aa13.44□□□□□ -0.26
HIF3A-203ENST00000291300 RPEQ96AT9 228 aa13.44□□□□□ -0.26
HIF3A-203ENST00000291300 NKX6-2Q9C056 277 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-203ENST00000291300 COMMD5Q9GZQ3 224 aa13.44□□□□□ -0.26
HIF3A-203ENST00000291300 SLC25A22Q9H936 323 aa13.44□□□□□ -0.26
HIF3A-203ENST00000291300 HILPDAQ9Y5L2 63 aa13.44□□□□□ -0.26
HIF3A-203ENST00000291300 OR13C7P0DN81 318 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 CD24P25063 80 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 RAB11AP62491 216 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 PAX2Q02962 417 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 WT1-ASQ06250 92 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 PEA15Q15121 130 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 LFNGQ8NES3 379 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 MBD3L1Q8WWY6 194 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 KIAA1456Q9P272 454 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 ABCA2Q9BZC7 2435 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 hCG_1809904A0A1W2PP81 198 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 A0A1W2PPE2 198 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 A0A1W2PR64 198 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 A0A1W2PRV1 198 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 DNASE2O00115 360 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-203ENST00000291300 LY86O95711 162 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 PRTN3P24158 256 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 LMO4P61968 165 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 ICAM4Q14773 271 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 BSXQ3C1V8 233 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 ZNF787Q6DD87 383 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 VMO1Q7Z5L0 202 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 OR11H6Q8NGC7 330 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 TMPRSS5Q9H3S3 457 aa13.43□□□□□ -0.26
HIF3A-203ENST00000291300 TRAV1-1A0A0B4J248 108 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 M0R1W7 72 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 TIMM23O14925 209 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 YIF1AO95070 293 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 CRYGBP07316 175 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 DLK1P80370 383 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 TPTE2P1Q5T6R2 138 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 C19orf35Q6ZS72 473 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 DYNAPQ8N1N2 210 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 OR10G4Q8NGN3 311 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 OR10G9Q8NGN4 311 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 OR10G7Q8NGN6 311 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 OR1L8Q8NGR8 309 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 NRGNQ92686 78 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 FKBP11Q9NYL4 201 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 GNG13Q9P2W3 67 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 LSM4Q9Y4Z0 139 aaKnown RBP13.42□□□□□ -0.26
HIF3A-203ENST00000291300 MAP1LC3B2A6NCE7 125 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 ODF3BA8MYP8 253 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 REG1AP05451 166 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 APELAP0DMC3 54 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 PSG5Q15238 335 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 FAM122CQ6P4D5 195 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 SVBPQ8N300 66 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 RXFP4Q8TDU9 374 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 GGTLC1Q9BX51 225 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 MAP1LC3BQ9GZQ8 125 aa13.42□□□□□ -0.26
HIF3A-203ENST00000291300 UBR5O95071 2799 aaPredicted RBP13.41□□□□□ -0.26
HIF3A-203ENST00000291300 VMA21Q3ZAQ7 101 aa13.41□□□□□ -0.26
HIF3A-203ENST00000291300 MIC13Q5XKP0 118 aa13.41□□□□□ -0.26
HIF3A-203ENST00000291300 TMEM88Q6PEY1 159 aa13.41□□□□□ -0.26
HIF3A-203ENST00000291300 ZNF709Q8N972 641 aa13.41□□□□□ -0.26
HIF3A-203ENST00000291300 OR4A5Q8NH83 315 aa13.41□□□□□ -0.26
HIF3A-203ENST00000291300 SSMEM1Q8WWF3 244 aa13.41□□□□□ -0.26
HIF3A-203ENST00000291300 PBDC1Q9BVG4 233 aa13.41□□□□□ -0.26
HIF3A-203ENST00000291300 ZFHX3Q15911 3703 aa13.41□□□□□ -0.26
HIF3A-203ENST00000291300 BTBD17A6NE02 478 aa13.4□□□□□ -0.26
HIF3A-203ENST00000291300 FCN1O00602 326 aa13.4□□□□□ -0.26
HIF3A-203ENST00000291300 SCAF4O95104 1147 aaKnown RBP13.4□□□□□ -0.26
HIF3A-203ENST00000291300 HTR1DP28221 377 aa13.4□□□□□ -0.26
HIF3A-203ENST00000291300 LGALS7P47929 136 aa13.4□□□□□ -0.26
HIF3A-203ENST00000291300 SSBP2P81877 361 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-203ENST00000291300 VSTM2AQ8TAG5 236 aa13.4□□□□□ -0.26
HIF3A-203ENST00000291300 GGACTQ9BVM4 153 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms