RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TTC9CQ8N5M4 171 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 BEND2Q8NDZ0 799 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 DTX4Q9Y2E6 619 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 OTOFQ9HC10 1997 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 ZNFX1Q9P2E3 1918 aaKnown RBP3.46□□□□□ -1.86
SCN3A-201ENST00000283254 IGHV2OR16-5A0A0B4J2B6 119 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 ARL14EPLP0DKL9 152 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 SSTR5P35346 364 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 EMP1P54849 157 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 IRF3Q14653 427 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 TMEM170BQ5T4T1 132 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 MORN3Q6PF18 240 aaPredicted RBP3.46□□□□□ -1.86
SCN3A-201ENST00000283254 ACP7Q6ZNF0 438 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 SRSF12Q8WXF0 261 aaKnown RBP3.46□□□□□ -1.86
SCN3A-201ENST00000283254 TDRD15B5MCY1 1934 aaKnown RBP3.46□□□□□ -1.86
SCN3A-201ENST00000283254 PCNX2A6NKB5 2137 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 C9JCJ5 164 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 CECR9P0C854 216 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 TDGF1P13385 188 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 EFNB2P52799 333 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 ZNF826PQ6ZT77 177 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 NABP2Q9BQ15 211 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 MS4A6AQ9H2W1 248 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 IFI27L2Q9H2X8 130 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 IGLV1-36A0A0B4J1U3 117 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 UPK2O00526 184 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 ACSF3Q4G176 576 aaPredicted RBP3.46□□□□□ -1.86
SCN3A-201ENST00000283254 TTC32Q5I0X7 151 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 ZNF880Q6PDB4 577 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 OR5AN1Q8NGI8 311 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 B4DSR2 109 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 MOSPD3O75425 235 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 PGLYRP1O75594 196 aaPredicted RBP3.46□□□□□ -1.86
SCN3A-201ENST00000283254 C2orf68Q2NKX9 166 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 GCSAMLQ5JQS6 135 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 ZAR1Q86SH2 424 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 VKORC1L1Q8N0U8 176 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 AQP3Q92482 292 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 PAM16Q9Y3D7 125 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 TBL2Q9Y4P3 447 aaKnown RBP3.46□□□□□ -1.86
SCN3A-201ENST00000283254 MYO5AQ9Y4I1 1855 aaKnown RBP3.46□□□□□ -1.86
SCN3A-201ENST00000283254 ARAP2Q8WZ64 1704 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.46□□□□□ -1.86
SCN3A-201ENST00000283254 M0R381 172 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 ORMDL2Q53FV1 153 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 C19orf48Q6RUI8 117 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 SLC22A18ASQ8N1D0 253 aa3.46□□□□□ -1.86
SCN3A-201ENST00000283254 TRAV20A0A0B4J274 112 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 THBDP07204 575 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 HTN3P15516 51 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 LINC01560Q8TB33 94 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 NRN1Q9NPD7 142 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 FANCMQ8IYD8 2048 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 DOCK3Q8IZD9 2030 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 LOC389332A0A1B0GUA5 103 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 FAM90A9PA6NNJ1 464 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 CD160O95971 181 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 IGLV3-19P01714 112 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 AGAP20933 346 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 GPR183P32249 361 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 LDLRAD2Q5SZI1 272 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 FAM71F2Q6NXP2 309 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 OVOL2Q9BRP0 275 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 CYSLTR1Q9Y271 337 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 IL18BPO95998 194 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 IGKV1D-33P01593 117 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 IGKV1-33P01594 117 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 RUNX1Q01196 453 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 ORMDL3Q8N138 153 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 RNF182Q8N6D2 247 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 SLC25A38Q96DW6 304 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 HSPB9Q9BQS6 159 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 DPH3P1Q9H4G8 78 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 PEF1Q9UBV8 284 aaKnown RBP3.45□□□□□ -1.86
SCN3A-201ENST00000283254 SHANK3Q9BYB0 1731 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 ZFC3H1O60293 1989 aaKnown RBP3.45□□□□□ -1.86
SCN3A-201ENST00000283254 SCN10AQ9Y5Y9 1956 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 TRGV4A0A0C4DH28 118 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 A1L4Q6 167 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 EREGO14944 169 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 WNT2P09544 360 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 SLC25A16P16260 332 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 SRIP30626 198 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 STHQ8IWL8 128 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 NPDC1Q9NQX5 325 aaPredicted RBP3.45□□□□□ -1.86
SCN3A-201ENST00000283254 KLK13Q9UKR3 277 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 MRPS18CQ9Y3D5 142 aaKnown RBP3.45□□□□□ -1.86
SCN3A-201ENST00000283254 A0A1W2PP11 408 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 TCRBV4S1A1TA0A5B7 111 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 MED19A0JLT2 244 aaPredicted RBP3.45□□□□□ -1.86
SCN3A-201ENST00000283254 CGB1A6NKQ9 187 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 C17orf100A8MU93 164 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 C1QTNF9BB2RNN3 333 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 EIF3GO75821 320 aaKnown RBP eCLIP3.45□□□□□ -1.86
SCN3A-201ENST00000283254 IGFBP6P24592 240 aaPredicted RBP3.45□□□□□ -1.86
SCN3A-201ENST00000283254 RND3P61587 244 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 CDCP2Q5VXM1 449 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 NPIPB3Q92617 1050 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 RNF166Q96A37 237 aaPredicted RBP3.45□□□□□ -1.86
SCN3A-201ENST00000283254 PRO1933Q9H354 126 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms