RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 CNTFRP26992 372 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 TMEM30BQ3MIR4 351 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 WDR25Q64LD2 544 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-201ENST00000279247 OR10A7Q8NGE5 316 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 OR5AN1Q8NGI8 311 aa14.55□□□□□ -0.08
CAPN1-201ENST00000279247 A0A1W2PPH5 198 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 C22orf46C9J442 243 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 GATA2P23769 480 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-201ENST00000279247 RPL8P62917 257 aaKnown RBP14.54□□□□□ -0.08
CAPN1-201ENST00000279247 PNKDQ8N490 385 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 OR4C13Q8NGP0 309 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 MBD3L1Q8WWY6 194 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 TMEM186Q96B77 213 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 TMEM204Q9BSN7 226 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 ACTR3CQ9C0K3 210 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-201ENST00000279247 URGCP-MRPS24S4R325 110 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 A0A1W2PPV4 95 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 AARDQ4LEZ3 155 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 C2CD4CQ8TF44 421 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 MLXQ9UH92 298 aa14.54□□□□□ -0.08
CAPN1-201ENST00000279247 ACTL6BO94805 426 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 CD24P25063 80 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 CDC34P49427 236 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-201ENST00000279247 PPOXP50336 477 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 KHDC3LQ587J8 217 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 OSR1Q8TAX0 266 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-201ENST00000279247 SMCO4Q9NRQ5 59 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 TIMM9Q9Y5J7 89 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 PXMP4Q9Y6I8 212 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 RNF224P0DH78 156 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 GNB1P62873 340 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 FAM24BQ8N5W8 94 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 RPUSD4Q96CM3 377 aaKnown RBP14.53□□□□□ -0.08
CAPN1-201ENST00000279247 TIMD4Q96H15 378 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 WASHC3Q9Y3C0 194 aa14.53□□□□□ -0.08
CAPN1-201ENST00000279247 CTXND1A0A1B0GTU2 59 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 HSPB1P04792 205 aaKnown RBP14.52□□□□□ -0.08
CAPN1-201ENST00000279247 IGFBP2P18065 325 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 TAGLN2P37802 199 aaKnown RBP14.52□□□□□ -0.08
CAPN1-201ENST00000279247 PRCDQ00LT1 54 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 KLRD1Q13241 179 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 VWC2Q2TAL6 325 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 SP5Q6BEB4 398 aaPredicted RBP14.52□□□□□ -0.08
CAPN1-201ENST00000279247 C19orf35Q6ZS72 473 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 Q8N7P7 452 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 ST6GALNAC6Q969X2 333 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 NIPSNAP3BQ9BS92 247 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 PARD6GQ9BYG4 376 aaPredicted RBP14.52□□□□□ -0.08
CAPN1-201ENST00000279247 ACOT6Q3I5F7 207 aaPredicted RBP14.52□□□□□ -0.08
CAPN1-201ENST00000279247 RAB1CQ92928 201 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 GGTLC1Q9BX51 225 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 ZNF430Q9H8G1 570 aaPredicted RBP14.52□□□□□ -0.08
CAPN1-201ENST00000279247 HILPDAQ9Y5L2 63 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 INSIG2Q9Y5U4 225 aa14.52□□□□□ -0.08
CAPN1-201ENST00000279247 TRAV1-1A0A0B4J248 108 aa14.52□□□□□ -0.09
CAPN1-201ENST00000279247 PRSS46E5RG02 174 aa14.52□□□□□ -0.09
CAPN1-201ENST00000279247 PAGE4O60829 102 aa14.52□□□□□ -0.09
CAPN1-201ENST00000279247 DLK1P80370 383 aa14.52□□□□□ -0.09
CAPN1-201ENST00000279247 OR5T1Q8NG75 326 aa14.52□□□□□ -0.09
CAPN1-201ENST00000279247 NEIL1Q96FI4 390 aaPredicted RBP14.52□□□□□ -0.09
CAPN1-201ENST00000279247 TRBV23-1A0A0A0MS06 115 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 CYB5BO43169 146 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 B2MP61769 119 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 POU2AF1Q16633 256 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 OR4F5Q8NH21 305 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 ITLN2Q8WWU7 325 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-201ENST00000279247 ACY3Q96HD9 319 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 OR4F4Q96R69 305 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 NPVFQ9HCQ7 196 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 A0A1B0GW64 132 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 hCG_1809904A0A1W2PP81 198 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 A0A1W2PR64 198 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 A0A1W2PRV1 198 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 YIF1AO95070 293 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 CRYBA1P05813 215 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 CST9LP1Q5W188 147 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 RPEQ96AT9 228 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 BET1LQ9NYM9 111 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 CELSR2Q9HCU4 2923 aa14.51□□□□□ -0.09
CAPN1-201ENST00000279247 MBP02144 154 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 TEPPQ6URK8 271 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 C1orf159Q96HA4 380 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 CLEC7AQ9BXN2 247 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 VAX2Q9UIW0 290 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 IGHV3-21A0A0B4J1V1 117 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 IFNA1P01562 189 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 HLA-DRB5Q30154 266 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 HCP5Q6MZN7 132 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 CENPVQ7Z7K6 275 aaPredicted RBP14.5□□□□□ -0.09
CAPN1-201ENST00000279247 UNKLQ9H9P5 680 aaKnown RBP14.5□□□□□ -0.09
CAPN1-201ENST00000279247 CELSR1Q9NYQ6 3014 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 DOPEY1Q5JWR5 2465 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 IL3RAP26951 378 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 TMEM177Q53S58 311 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 SPATA31B1PQ5VZV4 182 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 PDPNQ86YL7 162 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 OR1L8Q8NGR8 309 aa14.5□□□□□ -0.09
CAPN1-201ENST00000279247 PSMB3P49720 205 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 PRRX1P54821 245 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 LGALS4P56470 323 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms