RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TMPRSS3P57727 454 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 GDF5OSQ5U4N7 250 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 FAM69BQ5VUD6 431 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 ZNF562Q6V9R5 426 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 GCSAMQ8N6F7 178 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 OR51H1Q8NH63 302 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 H1FXQ92522 213 aaKnown RBP7.66□□□□□ -1.18
PDGFC-201ENST00000274071 GGTLC1Q9BX51 225 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 RAB1BQ9H0U4 201 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 YTHDF2Q9Y5A9 579 aaKnown RBP7.66□□□□□ -1.18
PDGFC-201ENST00000274071 CPAMD8Q8IZJ3 1885 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 SMIM27A0A1W2PRY6 76 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 MS4A18H0YCH9 400 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 H0YIG0 161 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 RRHO14718 337 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 RER1O15258 196 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 ARL14EPLP0DKL9 152 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 COL9A1P20849 921 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 MS4A18Q3C1V0 323 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 PP6455Q8WZ26 134 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 TIMM29Q9BSF4 260 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 TMEM147Q9BVK8 224 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 ADAMTS9Q9P2N4 1935 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 TRGV10A0A0A0MS01 117 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 LRRC30A6NM36 301 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 PDCD6O75340 191 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 OR9G9P0C7N8 305 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 VDAC2P45880 294 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-201ENST00000274071 TCEA2Q15560 299 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 OR4A16Q8NH70 328 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 HRASLS2Q9NWW9 162 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 A0A1W2PPV4 95 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 B9A039 149 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 IGKV1-5P01602 117 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 SCTP09683 121 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 RPS16P62249 146 aaKnown RBP7.65□□□□□ -1.18
PDGFC-201ENST00000274071 GUSBP1Q15486 140 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 TMEM211Q6ICI0 200 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 SLC25A47Q6Q0C1 308 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 Q8N7P7 452 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 NANOS1Q8WY41 292 aaKnown RBP7.65□□□□□ -1.18
PDGFC-201ENST00000274071 EMC6Q9BV81 110 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 TM2D2Q9BX73 214 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 MPC1Q9Y5U8 109 aa7.65□□□□□ -1.18
PDGFC-201ENST00000274071 IZUMO1RA6ND01 250 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 SYNGR1O43759 233 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 LTBRP36941 435 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 XGP55808 180 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 ZNF718Q3SXZ3 478 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 SYT8Q8NBV8 401 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 GTSF1Q8WW33 167 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 MAP1LC3CQ9BXW4 147 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 OSTCQ9NRP0 149 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 DEPPQ9NTK1 212 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 OR1A1Q9P1Q5 309 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 PIGLQ9Y2B2 252 aa7.65□□□□□ -1.19
PDGFC-201ENST00000274071 A0A1W2PRD5 423 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 A0A1W2PRF3 423 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 A0A1W2PRM7 423 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 PMS2P5A8MQ11 134 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 TGFBR3LH3BV60 316 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 NHLRC4P0CG21 123 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-201ENST00000274071 CDAP32320 146 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 NTF4P34130 210 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 ARL4DP49703 201 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 RSPO4Q2I0M5 234 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-201ENST00000274071 TEPPQ6URK8 271 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 TMEM54Q969K7 222 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 C1QTNF5Q9BXJ0 243 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 FGF22Q9HCT0 170 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 MTCH1Q9NZJ7 389 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 ATP23Q9Y6H3 246 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 A0A1W2PRE2 83 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 TUSC2O75896 110 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 DHRS3O75911 302 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 SMIM13P0DJ93 91 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 GPR12P47775 334 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 GRB2P62993 217 aaKnown RBP7.64□□□□□ -1.19
PDGFC-201ENST00000274071 CATR1Q13166 79 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 PDLIM3Q53GG5 364 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-201ENST00000274071 LYSMD4Q5XG99 296 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 PQLC2Q6ZP29 291 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 Q6ZUT4 128 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 TEX45Q8NA69 505 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 WIPF2Q8TF74 440 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-201ENST00000274071 ZNF442Q9H7R0 627 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 WNT16Q9UBV4 365 aa7.64□□□□□ -1.19
PDGFC-201ENST00000274071 IGKV1-27A0A075B6S5 117 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 PRSS38A1L453 326 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 PRR19A6NJB7 356 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 FAM90A27PA6NNH2 459 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 F5H5K5 113 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 H0Y8X5 98 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 UTS2O95399 124 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 IGLV3-1P01715 115 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 MFAP5Q13361 173 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 ANXA2RQ3ZCQ2 193 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 CENPWQ5EE01 88 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 TMEM116Q8NCL8 245 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 FAM168AQ92567 244 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms