RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PLA2G2CQ5R387 149 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 SCN8AQ9UQD0 1980 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 TMEM250H0YL14 139 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 MGPP08493 103 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 PLAURQ03405 335 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 ZNF738Q8NE65 137 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 NPCDR1Q9BY65 106 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 MRPL20Q9BYC9 149 aaKnown RBP12.91□□□□□ -0.34
TIMP3-201ENST00000266085 IFI27L2Q9H2X8 130 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 MOSP00540 346 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 UNQ6494/PRO21346Q6UXR6 183 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 PARLQ9H300 379 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 CBLN4Q9NTU7 201 aa12.91□□□□□ -0.34
TIMP3-201ENST00000266085 A0A0A6YYD4 124 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 IGHV1-46P01743 117 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 PRB3Q04118 309 aaPredicted RBP12.9□□□□□ -0.34
TIMP3-201ENST00000266085 MSRB2Q9Y3D2 182 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 RRHO14718 337 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 IGHG3P01860 377 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 FOSL1P15407 271 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 ATP5G2Q06055 141 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 LAMTOR1Q6IAA8 161 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 NAT1P18440 290 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 GCHFRP30047 84 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 RTN4RL2Q86UN3 420 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 MAP1LC3CQ9BXW4 147 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 IGKV1D-8A0A087WSZ0 117 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 NPPCP23582 126 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 WFIKKN1Q96NZ8 548 aa12.9□□□□□ -0.34
TIMP3-201ENST00000266085 H3BTX0 84 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 SMAD7O15105 426 aaKnown RBP12.89□□□□□ -0.35
TIMP3-201ENST00000266085 IGKV1D-33P01593 117 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 IGKV1-33P01594 117 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 SMIM6P0DI80 62 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 GSX1Q9H4S2 264 aaPredicted RBP12.89□□□□□ -0.35
TIMP3-201ENST00000266085 SLC25A15Q9Y619 301 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.89□□□□□ -0.35
TIMP3-201ENST00000266085 TRGC2P03986 189 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 IL6RP08887 468 aaPredicted RBP12.89□□□□□ -0.35
TIMP3-201ENST00000266085 MORN2Q502X0 79 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 C7orf69Q9H7B7 122 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 PNRC2Q9NPJ4 139 aaKnown RBP12.89□□□□□ -0.35
TIMP3-201ENST00000266085 TRAV14DV4A0A0A6YYC5 116 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 TGFAP01135 160 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 SRRM5B3KS81 715 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 AGAP20933 346 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 MPZP25189 248 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 EIF4E3Q8N5X7 224 aaKnown RBP12.89□□□□□ -0.35
TIMP3-201ENST00000266085 EEF1AKMT3Q96AZ1 226 aa12.89□□□□□ -0.35
TIMP3-201ENST00000266085 MBD3L4A6NDZ8 208 aaPredicted RBP12.88□□□□□ -0.35
TIMP3-201ENST00000266085 MBD3L3A6NE82 208 aaPredicted RBP12.88□□□□□ -0.35
TIMP3-201ENST00000266085 MBD3L5A6NJ08 208 aaPredicted RBP12.88□□□□□ -0.35
TIMP3-201ENST00000266085 CGB1A6NKQ9 187 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 Q1RN00 199 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 CYP2G1PQ6ZSU1 146 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 MBD3L2Q8NHZ7 208 aaPredicted RBP12.88□□□□□ -0.35
TIMP3-201ENST00000266085 HELZP42694 1942 aaKnown RBP12.88□□□□□ -0.35
TIMP3-201ENST00000266085 SAA2-SAA4A0A096LPE2 208 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 HLA-DQA1P01909 254 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 SAA2P0DJI9 122 aaPredicted RBP12.88□□□□□ -0.35
TIMP3-201ENST00000266085 CA7P43166 264 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 RELQ04864 619 aaPredicted RBP12.88□□□□□ -0.35
TIMP3-201ENST00000266085 Q6ZN92 141 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 IGKV1-27A0A075B6S5 117 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 CXorf65A6NEN9 183 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 TMEM177Q53S58 311 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 LY6G6FQ5SQ64 297 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 MYLKQ15746 1914 aa12.88□□□□□ -0.35
TIMP3-201ENST00000266085 TRAV20A0A0B4J274 112 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 A0A0G2JNJ9 132 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 HAX1O00165 279 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 SELLP14151 372 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 PSG9Q00887 426 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 LINC00305Q7Z4B0 112 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 CACNG8Q8WXS5 425 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 SGK494Q96LW2 274 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 Q9UFV3 132 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 GLRX5Q86SX6 157 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 MARVELD3Q96A59 401 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 RSPO3Q9BXY4 272 aaPredicted RBP12.87□□□□□ -0.35
TIMP3-201ENST00000266085 HSPB8Q9UJY1 196 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 EGR1P18146 543 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 FHL1Q13642 323 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 TMEM97Q5BJF2 176 aa12.87□□□□□ -0.35
TIMP3-201ENST00000266085 LDLRAD4O15165 306 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 IGFBP2P18065 325 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 TWIST1Q15672 202 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 ZNF506Q5JVG8 444 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 ZNF343Q6P1L6 599 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 RNF126Q9BV68 326 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 GBF1Q92538 1859 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 RBFOX2O43251 390 aaKnown RBP eCLIP12.86□□□□□ -0.35
TIMP3-201ENST00000266085 OTX1P32242 354 aaPredicted RBP12.86□□□□□ -0.35
TIMP3-201ENST00000266085 MAS1LP35410 378 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 WDR25Q64LD2 544 aaPredicted RBP12.86□□□□□ -0.35
TIMP3-201ENST00000266085 FAM166AQ6J272 317 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 TMEM133Q9H2Q1 129 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 F8VVB4 439 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 F8VWA3 439 aa12.86□□□□□ -0.35
TIMP3-201ENST00000266085 TRGV3P03979 118 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms