RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ZNF585BQ52M93 769 aa14.46□□□□□ -0.09
SDF4-201ENST00000263741 FAM122CQ6P4D5 195 aa14.46□□□□□ -0.09
SDF4-201ENST00000263741 TP53RKQ96S44 253 aa14.46□□□□□ -0.09
SDF4-201ENST00000263741 FAM103A1Q9BTL3 118 aaKnown RBP14.46□□□□□ -0.09
SDF4-201ENST00000263741 GPR132Q9UNW8 380 aa14.46□□□□□ -0.09
SDF4-201ENST00000263741 RAB19A4D1S5 217 aa14.46□□□□□ -0.09
SDF4-201ENST00000263741 ATP6V0E1O15342 81 aa14.46□□□□□ -0.09
SDF4-201ENST00000263741 SSBP2P81877 361 aaPredicted RBP14.46□□□□□ -0.09
SDF4-201ENST00000263741 MRGPRG-AS1Q2M3A8 158 aa14.46□□□□□ -0.09
SDF4-201ENST00000263741 SP6Q3SY56 376 aa14.46□□□□□ -0.09
SDF4-201ENST00000263741 VMA21Q3ZAQ7 101 aa14.46□□□□□ -0.09
SDF4-201ENST00000263741 C3orf56Q8N813 242 aa14.46□□□□□ -0.09
SDF4-201ENST00000263741 TEX13DA0A0J9YY54 714 aaPredicted RBP14.45□□□□□ -0.1
SDF4-201ENST00000263741 NUDT19A8MXV4 375 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 RBFOX2O43251 390 aaKnown RBP eCLIP14.45□□□□□ -0.12e-6■■□□□ 13.5
SDF4-201ENST00000263741 SFT2D2O95562 160 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 LPAR6P43657 344 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 UBE2KP61086 200 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 RND3P61587 244 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 ZNF329Q86UD4 541 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 PPP1R27Q86WC6 154 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 ABHD5Q8WTS1 349 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 TMEM230Q96A57 120 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 NARS2Q96I59 477 aaKnown RBP14.45□□□□□ -0.1
SDF4-201ENST00000263741 RHOVQ96L33 236 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 PRELID1Q9Y255 219 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 DNHD1Q96M86 4753 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 A0A1B0GUS0 222 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 CTRB1P17538 263 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 ECI1P42126 302 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 CX3CL1P78423 397 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 SURF2Q15527 256 aaPredicted RBP14.45□□□□□ -0.1
SDF4-201ENST00000263741 CTRB2Q6GPI1 263 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 CCDC71LQ8N9Z2 235 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 MARC2Q969Z3 335 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 WNT10AQ9GZT5 417 aa14.45□□□□□ -0.1
SDF4-201ENST00000263741 ANK2Q01484 3957 aa14.44□□□□□ -0.1
SDF4-201ENST00000263741 HPRT1P00492 218 aa14.44□□□□□ -0.1
SDF4-201ENST00000263741 DEFA5Q01523 94 aa14.44□□□□□ -0.1
SDF4-201ENST00000263741 C10orf55Q5SWW7 151 aa14.44□□□□□ -0.1
SDF4-201ENST00000263741 R3HDM4Q96D70 268 aa14.44□□□□□ -0.1
SDF4-201ENST00000263741 AIFM2Q9BRQ8 373 aa14.44□□□□□ -0.1
SDF4-201ENST00000263741 ZNF430Q9H8G1 570 aaPredicted RBP14.44□□□□□ -0.1
SDF4-201ENST00000263741 PRR13Q9NZ81 148 aa14.44□□□□□ -0.1
SDF4-201ENST00000263741 WSB1Q9Y6I7 421 aa14.44□□□□□ -0.1
SDF4-201ENST00000263741 C3orf85A0A1B0GTC6 90 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 G3V318 75 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 MYOD1P15172 320 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 G6PCP35575 357 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 OR4A47Q6IF82 309 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 FOXRED2Q8IWF2 684 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 PLEKHA2Q9HB19 425 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 TRAV3A0A0B4J244 114 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 KCNAB3O43448 404 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 HRASP01112 189 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 KRASP01116 189 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 IGKV1-39P01597 117 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 IGKV1D-39P04432 117 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 OR5AC1P0C628 307 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 APELAP0DMC3 54 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 EIF5AP63241 154 aaKnown RBP14.43□□□□□ -0.1
SDF4-201ENST00000263741 ECSCRQ19T08 205 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 BPIFCQ8NFQ6 507 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 DMBX1Q8NFW5 382 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 CD300LFQ8TDQ1 290 aa14.43□□□□□ -0.1
SDF4-201ENST00000263741 H0Y980 276 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 AP4M1O00189 453 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 KBTBD11O94819 623 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 NQO2P16083 231 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 TNXAQ16473 311 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 PRSS8Q16651 343 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 CENPVQ7Z7K6 275 aaPredicted RBP14.42□□□□□ -0.1
SDF4-201ENST00000263741 PUSL1Q8N0Z8 303 aaKnown RBP14.42□□□□□ -0.1
SDF4-201ENST00000263741 TEX45Q8NA69 505 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 RNF141Q8WVD5 230 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 NAA60Q9H7X0 242 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 TMEM140Q9NV12 185 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 MARCH11A6NNE9 402 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 MPTX1A8MV57 137 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 FXYD3Q14802 87 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 PRSS54Q6PEW0 395 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 BAP18Q8IXM2 172 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 WIPF2Q8TF74 440 aaPredicted RBP14.42□□□□□ -0.1
SDF4-201ENST00000263741 ARPC1AQ92747 370 aa14.42□□□□□ -0.1
SDF4-201ENST00000263741 NKX6-2Q9C056 277 aaPredicted RBP14.42□□□□□ -0.1
SDF4-201ENST00000263741 PSMB11A5LHX3 300 aa14.41□□□□□ -0.1
SDF4-201ENST00000263741 CRYM-AS1A6NIL9 109 aa14.41□□□□□ -0.1
SDF4-201ENST00000263741 CNIH1O95406 144 aa14.41□□□□□ -0.1
SDF4-201ENST00000263741 CD28P10747 220 aa14.41□□□□□ -0.1
SDF4-201ENST00000263741 EGR2P11161 476 aaPredicted RBP14.41□□□□□ -0.1
SDF4-201ENST00000263741 LCNL1Q6ZST4 164 aa14.41□□□□□ -0.1
SDF4-201ENST00000263741 OR5AU1Q8NGC0 362 aa14.41□□□□□ -0.1
SDF4-201ENST00000263741 ZNF747Q9BV97 191 aa14.41□□□□□ -0.1
SDF4-201ENST00000263741 OPN1MWP04001 364 aa14.4□□□□□ -0.1
SDF4-201ENST00000263741 SERPINE2P07093 398 aa14.4□□□□□ -0.1
SDF4-201ENST00000263741 OPN1MW2P0DN77 364 aa14.4□□□□□ -0.1
SDF4-201ENST00000263741 OPN1MW3P0DN78 364 aa14.4□□□□□ -0.1
SDF4-201ENST00000263741 IZUMO4Q1ZYL8 232 aa14.4□□□□□ -0.1
SDF4-201ENST00000263741 LYL1P12980 280 aa14.4□□□□□ -0.1
SDF4-201ENST00000263741 ERVK-16P61578 105 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms