RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■■■□□ 17.8
SMARCB1-201ENST00000263121 DFFBO76075 338 aa18.29■□□□□ 0.52
SMARCB1-201ENST00000263121 IFNA10P01566 189 aa18.29■□□□□ 0.52
SMARCB1-201ENST00000263121 BRS3P32247 399 aa18.29■□□□□ 0.52
SMARCB1-201ENST00000263121 HTR2BP41595 481 aa18.29■□□□□ 0.52
SMARCB1-201ENST00000263121 KLF17Q5JT82 389 aaPredicted RBP18.29■□□□□ 0.52
SMARCB1-201ENST00000263121 C10orf55Q5SWW7 151 aa18.29■□□□□ 0.52
SMARCB1-201ENST00000263121 OR8G2PQ6IF36 304 aa18.29■□□□□ 0.52
SMARCB1-201ENST00000263121 BRD3OSQ6XYD6 125 aa18.29■□□□□ 0.52
SMARCB1-201ENST00000263121 TMEM170AQ8WVE7 144 aa18.29■□□□□ 0.52
SMARCB1-201ENST00000263121 GINS3Q9BRX5 216 aa18.29■□□□□ 0.52
SMARCB1-201ENST00000263121 A0A1B0GW64 132 aa18.28■□□□□ 0.52
SMARCB1-201ENST00000263121 RPS10-NUDT3A0A1W2PQS6 291 aa18.28■□□□□ 0.52
SMARCB1-201ENST00000263121 SCAF4O95104 1147 aaKnown RBP18.28■□□□□ 0.52
SMARCB1-201ENST00000263121 SLC38A11Q08AI6 406 aa18.28■□□□□ 0.52
SMARCB1-201ENST00000263121 WFDC11Q8NEX6 87 aa18.28■□□□□ 0.52
SMARCB1-201ENST00000263121 SLC24A4Q8NFF2 622 aa18.28■□□□□ 0.52
SMARCB1-201ENST00000263121 FAM120AOSQ5T036 256 aa18.28■□□□□ 0.52
SMARCB1-201ENST00000263121 OR10W1Q8NGF6 305 aa18.28■□□□□ 0.52
SMARCB1-201ENST00000263121 FOXC2Q99958 501 aa18.28■□□□□ 0.52
SMARCB1-201ENST00000263121 KIAA1456Q9P272 454 aa18.28■□□□□ 0.52
SMARCB1-201ENST00000263121 A0A1W2PN81 502 aa18.27■□□□□ 0.52
SMARCB1-201ENST00000263121 FAM106CPP0CH98 169 aa18.27■□□□□ 0.52
SMARCB1-201ENST00000263121 CHRNA7P36544 502 aa18.27■□□□□ 0.52
SMARCB1-201ENST00000263121 COMPP49747 757 aaPredicted RBP18.27■□□□□ 0.52
SMARCB1-201ENST00000263121 SSBP2P81877 361 aaPredicted RBP18.27■□□□□ 0.52
SMARCB1-201ENST00000263121 TNXAQ16473 311 aa18.27■□□□□ 0.52
SMARCB1-201ENST00000263121 BSXQ3C1V8 233 aa18.27■□□□□ 0.52
SMARCB1-201ENST00000263121 OR10P1Q8NGE3 313 aa18.27■□□□□ 0.52
SMARCB1-201ENST00000263121 TMED6Q8WW62 240 aa18.27■□□□□ 0.52
SMARCB1-201ENST00000263121 PINX1Q96BK5 328 aaKnown RBP18.27■□□□□ 0.52
SMARCB1-201ENST00000263121 A0A0U1RQK1 487 aa18.26■□□□□ 0.51
SMARCB1-201ENST00000263121 OR8U8P0C7N1 319 aa18.26■□□□□ 0.51
SMARCB1-201ENST00000263121 TMEM11P17152 192 aa18.26■□□□□ 0.51
SMARCB1-201ENST00000263121 NPY1RP25929 384 aa18.26■□□□□ 0.51
SMARCB1-201ENST00000263121 PLGLAQ15195 96 aa18.26■□□□□ 0.51
SMARCB1-201ENST00000263121 CLLU1Q5K131 121 aa18.26■□□□□ 0.51
SMARCB1-201ENST00000263121 FAM74A1Q5RGS3 127 aa18.26■□□□□ 0.51
SMARCB1-201ENST00000263121 LILRB2Q8N423 598 aa18.26■□□□□ 0.51
SMARCB1-201ENST00000263121 MEGF9Q9H1U4 602 aa18.26■□□□□ 0.51
SMARCB1-201ENST00000263121 PDZD2O15018 2839 aa18.26■□□□□ 0.51
SMARCB1-201ENST00000263121 PRSS46E5RG02 174 aa18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 FCN1O00602 326 aa18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 ACTL6BO94805 426 aa18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 CA2P00918 260 aa18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 RPL27AP46776 148 aaKnown RBP18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 ATP6V1FQ16864 119 aa18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 C5orf64Q2M2E5 130 aa18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 EIF5AL1Q6IS14 154 aaKnown RBP18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 ATP5IP56385 69 aaPredicted RBP18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 RAB11AP62491 216 aa18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 ETV3LQ6ZN32 361 aa18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 HSD17B11Q8NBQ5 300 aa18.25■□□□□ 0.51
SMARCB1-201ENST00000263121 PRRC2AP48634 2157 aaKnown RBP18.24■□□□□ 0.51
SMARCB1-201ENST00000263121 SPP1P10451 314 aa18.24■□□□□ 0.51
SMARCB1-201ENST00000263121 WT1-ASQ06250 92 aa18.24■□□□□ 0.51
SMARCB1-201ENST00000263121 VWC2Q2TAL6 325 aa18.24■□□□□ 0.51
SMARCB1-201ENST00000263121 PCNPQ8WW12 178 aaKnown RBP18.24■□□□□ 0.51
SMARCB1-201ENST00000263121 SLC25A32Q9H2D1 315 aa18.24■□□□□ 0.51
SMARCB1-201ENST00000263121 FBXO24O75426 580 aa18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 IFNA5P01569 189 aa18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 NMBP08949 121 aa18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 SEC11BP0C7V7 166 aa18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 RNASE2P10153 161 aaKnown RBP18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 RAB14P61106 215 aa18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 GNB1P62873 340 aa18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 ERHP84090 104 aaKnown RBP18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 NDUFA5Q16718 116 aa18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 C2orf83Q53S99 150 aa18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 CYB5R2Q6BCY4 276 aa18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 TMEM147Q9BVK8 224 aa18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 PARD6GQ9BYG4 376 aaPredicted RBP18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 MAP1AP78559 2803 aaPredicted RBP18.23■□□□□ 0.51
SMARCB1-201ENST00000263121 UNC79Q9P2D8 2635 aa18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 IGLC7A0M8Q6 106 aa18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 ATP6V0CP27449 155 aa18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 SH3BGRL3Q9H299 93 aa18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 PLA2G2EQ9NZK7 142 aa18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 IFNA4P05014 189 aa18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 LRRC75BQ2VPJ9 315 aa18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 SRSF12Q8WXF0 261 aaKnown RBP18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 GGACTQ9BVM4 153 aa18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 UQCC1Q9NVA1 299 aa18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 C1RLQ9NZP8 487 aa18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 SOX21Q9Y651 276 aaPredicted RBP18.22■□□□□ 0.51
SMARCB1-201ENST00000263121 NCBP2LA6PVI3 153 aaKnown RBP18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 TEX22C9J3V5 150 aa18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 FSHBP01225 129 aa18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 FAM157CP0CG43 387 aa18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 SNCAP37840 140 aa18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 BPIFB3P59826 476 aa18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 CIARTQ8N365 385 aaPredicted RBP18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 Q8N9W7 124 aa18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 PIFOQ8TCI5 191 aa18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 WDR61Q9GZS3 305 aaKnown RBP18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 FAM96BQ9Y3D0 163 aa18.21■□□□□ 0.51
SMARCB1-201ENST00000263121 UBE2L5PA0A1B0GUS4 154 aa18.2■□□□□ 0.5
SMARCB1-201ENST00000263121 FBP1P09467 338 aa18.2■□□□□ 0.5
SMARCB1-201ENST00000263121 OR13C7P0DN81 318 aa18.2■□□□□ 0.5
SMARCB1-201ENST00000263121 DLK1P80370 383 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms