RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 AVPI1Q5T686 147 aa14.33□□□□□ -0.12
SSB-201ENST00000260956 ABHD12Q8N2K0 398 aa14.33□□□□□ -0.12
SSB-201ENST00000260956 OR13D1Q8NGV5 346 aa14.33□□□□□ -0.12
SSB-201ENST00000260956 HEYLQ9NQ87 328 aaPredicted RBP14.33□□□□□ -0.12
SSB-201ENST00000260956 VAX2Q9UIW0 290 aa14.33□□□□□ -0.12
SSB-201ENST00000260956 PUS1Q9Y606 427 aaKnown RBP eCLIP14.33□□□□□ -0.12
SSB-201ENST00000260956 PRRC2AP48634 2157 aaKnown RBP14.33□□□□□ -0.12
SSB-201ENST00000260956 IGHV1-69-2A0A0G2JMI3 117 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 A0A1W2PPE2 198 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 A0A1W2PPH5 198 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 NDUFB3O43676 98 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 MPDU1O75352 247 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 CD81P60033 236 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 RPP30P78346 268 aaKnown RBP14.32□□□□□ -0.12
SSB-201ENST00000260956 OR10G9Q8NGN4 311 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 OR10G7Q8NGN6 311 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 LHX4Q969G2 390 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 MGST2Q99735 147 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 BET1LQ9NYM9 111 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 HIVEP1P15822 2718 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 ZFP92A6NM28 416 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 SOX15O60248 233 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 IFNA10P01566 189 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 MT-ND4LP03901 98 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 PRCDQ00LT1 54 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 HABP2Q14520 560 aaPredicted RBP14.32□□□□□ -0.12
SSB-201ENST00000260956 HNF4GQ14541 408 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 RNF212Q495C1 297 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 AKIRIN2Q53H80 203 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 TMEM177Q53S58 311 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 LRRC10Q5BKY1 277 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 ARSJQ5FYB0 599 aaPredicted RBP14.32□□□□□ -0.12
SSB-201ENST00000260956 RAB24Q969Q5 203 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 ISOC2Q96AB3 205 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 GGTLC1Q9BX51 225 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 PRNDQ9UKY0 176 aa14.32□□□□□ -0.12
SSB-201ENST00000260956 NDUFA2O43678 99 aa14.31□□□□□ -0.12
SSB-201ENST00000260956 HOXA1P49639 335 aaPredicted RBP14.31□□□□□ -0.12
SSB-201ENST00000260956 RTL8BQ17RB0 113 aa14.31□□□□□ -0.12
SSB-201ENST00000260956 SLC24A4Q8NFF2 622 aa14.31□□□□□ -0.12
SSB-201ENST00000260956 NABP2Q9BQ15 211 aa14.31□□□□□ -0.12
SSB-201ENST00000260956 SLC39A9Q9NUM3 307 aa14.31□□□□□ -0.12
SSB-201ENST00000260956 FNDC10F2Z333 226 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 C17orf112F2Z3M2 114 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 SAA1P0DJI8 122 aaPredicted RBP14.3□□□□□ -0.12
SSB-201ENST00000260956 DEFA4P12838 97 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 NPY1RP25929 384 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 OPRK1P41145 380 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 ZNF841Q6ZN19 808 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 OSR1Q8TAX0 266 aaPredicted RBP14.3□□□□□ -0.12
SSB-201ENST00000260956 RAB1CQ92928 201 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 MALSU1Q96EH3 234 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 TVP23CQ96ET8 276 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 ACTR3CQ9C0K3 210 aaPredicted RBP14.3□□□□□ -0.12
SSB-201ENST00000260956 TMPRSS5Q9H3S3 457 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 OR51B2Q9Y5P1 312 aa14.3□□□□□ -0.12
SSB-201ENST00000260956 J3QR06 171 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 KBTBD11O94819 623 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 IGHV2-70P01814 119 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 GCSAMLQ5JQS6 135 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 WDR25Q64LD2 544 aaPredicted RBP14.29□□□□□ -0.12
SSB-201ENST00000260956 C11orf71Q6IPW1 123 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 DTX2Q86UW9 622 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 CCL19Q99731 98 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 ZANQ9Y493 2812 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 TRBV23-1A0A0A0MS06 115 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 OVOL3O00110 214 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 CA2P00918 260 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 IFNA1P01562 189 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 RAB11AP62491 216 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 DIAPH2-AS1Q14236 149 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 MUC15Q8N387 334 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 ZNF709Q8N972 641 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 H1FXQ92522 213 aaKnown RBP14.29□□□□□ -0.12
SSB-201ENST00000260956 NIPSNAP3BQ9BS92 247 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 MLXQ9UH92 298 aa14.29□□□□□ -0.12
SSB-201ENST00000260956 TEX50A0A1B0GTY4 177 aa14.28□□□□□ -0.12
SSB-201ENST00000260956 INS-IGF2F8WCM5 200 aa14.28□□□□□ -0.12
SSB-201ENST00000260956 NDUFS7O75251 213 aa14.28□□□□□ -0.12
SSB-201ENST00000260956 IGLV2-23P01705 113 aa14.28□□□□□ -0.12
SSB-201ENST00000260956 CDKN1AP38936 164 aa14.28□□□□□ -0.12
SSB-201ENST00000260956 PPOXP50336 477 aa14.28□□□□□ -0.12
SSB-201ENST00000260956 RAB13P51153 203 aa14.28□□□□□ -0.12
SSB-201ENST00000260956 MEF2BQ02080 365 aaPredicted RBP14.28□□□□□ -0.12
SSB-201ENST00000260956 DEFB113Q30KQ7 82 aa14.28□□□□□ -0.12
SSB-201ENST00000260956 ACOT6Q3I5F7 207 aaPredicted RBP14.28□□□□□ -0.12
SSB-201ENST00000260956 MBD6Q96DN6 1003 aa14.28□□□□□ -0.12
SSB-201ENST00000260956 HMGB3O15347 200 aaKnown RBP14.27□□□□□ -0.12
SSB-201ENST00000260956 IGHV1-8P0DP01 117 aa14.27□□□□□ -0.12
SSB-201ENST00000260956 RAB5AP20339 215 aa14.27□□□□□ -0.12
SSB-201ENST00000260956 CDC34P49427 236 aaPredicted RBP14.27□□□□□ -0.12
SSB-201ENST00000260956 MRGPRG-AS1Q2M3A8 158 aa14.27□□□□□ -0.12
SSB-201ENST00000260956 OR5B3Q8NH48 314 aa14.27□□□□□ -0.12
SSB-201ENST00000260956 GATAD1Q8WUU5 269 aa14.27□□□□□ -0.12
SSB-201ENST00000260956 SDF2L1Q9HCN8 221 aa14.27□□□□□ -0.12
SSB-201ENST00000260956 MANBALQ9NQG1 85 aa14.27□□□□□ -0.12
SSB-201ENST00000260956 CGB1A6NKQ9 187 aa14.27□□□□□ -0.13
SSB-201ENST00000260956 TMEM250H0YL14 139 aa14.27□□□□□ -0.13
SSB-201ENST00000260956 COL8A2P25067 703 aa14.27□□□□□ -0.13
SSB-201ENST00000260956 TAGLN2P37802 199 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms