RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 OR13C7P0DN81 318 aa14.27□□□□□ -0.12
TM6SF1-201ENST00000258909 LPAR6P43657 344 aa14.27□□□□□ -0.12
TM6SF1-201ENST00000258909 BTNL8Q6UX41 500 aa14.27□□□□□ -0.12
TM6SF1-201ENST00000258909 OR5H2Q8NGV7 314 aa14.27□□□□□ -0.12
TM6SF1-201ENST00000258909 FCAMRQ8WWV6 532 aa14.27□□□□□ -0.12
TM6SF1-201ENST00000258909 HINT2Q9BX68 163 aa14.27□□□□□ -0.12
TM6SF1-201ENST00000258909 COMMD9Q9P000 198 aa14.27□□□□□ -0.12
TM6SF1-201ENST00000258909 ANAPC10Q9UM13 185 aa14.27□□□□□ -0.12
TM6SF1-201ENST00000258909 NSG2Q9Y328 171 aa14.27□□□□□ -0.12
TM6SF1-201ENST00000258909 MARCH11A6NNE9 402 aa14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 KRASP01116 189 aa14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 TRAPPC2P0DI81 140 aa14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 TRAPPC2BP0DI82 140 aa14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 F2RP25116 425 aa14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 ERVK-16P61578 105 aa14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 WT1-ASQ06250 92 aa14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 TSPAN14Q8NG11 270 aa14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 FXYD6Q9H0Q3 95 aa14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 HYDINQ4G0P3 5121 aa14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 EPPK1P58107 5090 aaKnown RBP14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 PLECQ15149 4684 aaKnown RBP14.26□□□□□ -0.13
TM6SF1-201ENST00000258909 IGHV3-21A0A0B4J1V1 117 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 EIF4EP06730 217 aaKnown RBP14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 HLA-DMAP28067 261 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 PRSS3P35030 304 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 G6PCP35575 357 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 ZNF585BQ52M93 769 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 SLC25A24Q6NUK1 477 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 PLET1Q6UQ28 207 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 SLC16A13Q7RTY0 426 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 LYSMD2Q8IV50 215 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 OR52B4Q8NGK2 314 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 BORCS5Q969J3 196 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 SRSF8Q9BRL6 282 aaKnown RBP14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 THYN1Q9P016 225 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 A0A087WXM4 84 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 SERPINE2P07093 398 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 NAT1P18440 290 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 PTBP1P26599 531 aaKnown RBP eCLIP14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 HRH1P35367 487 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 TAS2R46P59540 309 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 GDPD1Q8N9F7 314 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 OR6F1Q8NGZ6 308 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 DGCR14Q96DF8 476 aaKnown RBP14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 VCX3AQ9NNX9 186 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 COMMD3Q9UBI1 195 aa14.25□□□□□ -0.13
TM6SF1-201ENST00000258909 OR2T8A6NH00 312 aa14.24□□□□□ -0.13
TM6SF1-201ENST00000258909 MFAP2P55001 183 aa14.24□□□□□ -0.13
TM6SF1-201ENST00000258909 PHLDA2Q53GA4 152 aa14.24□□□□□ -0.13
TM6SF1-201ENST00000258909 CMTM1Q8IZ96 169 aa14.24□□□□□ -0.13
TM6SF1-201ENST00000258909 OR1L8Q8NGR8 309 aa14.24□□□□□ -0.13
TM6SF1-201ENST00000258909 SLC25A46Q96AG3 418 aa14.24□□□□□ -0.13
TM6SF1-201ENST00000258909 NDUFA4L2Q9NRX3 87 aa14.24□□□□□ -0.13
TM6SF1-201ENST00000258909 OR51B2Q9Y5P1 312 aa14.24□□□□□ -0.13
TM6SF1-201ENST00000258909 GPR31O00270 319 aa14.23□□□□□ -0.13
TM6SF1-201ENST00000258909 TGOLN2O43493 480 aa14.23□□□□□ -0.13
TM6SF1-201ENST00000258909 NCS1P62166 190 aa14.23□□□□□ -0.13
TM6SF1-201ENST00000258909 DBX1A6NMT0 343 aa14.22□□□□□ -0.13
TM6SF1-201ENST00000258909 FGF2P09038 288 aa14.22□□□□□ -0.13
TM6SF1-201ENST00000258909 C8orf88P0DMB2 117 aa14.22□□□□□ -0.13
TM6SF1-201ENST00000258909 RBPMS2Q6ZRY4 209 aaKnown RBP14.22□□□□□ -0.13
TM6SF1-201ENST00000258909 SNX29P2Q8IUI4 249 aa14.22□□□□□ -0.13
TM6SF1-201ENST00000258909 VN1R17PQ8TDU5 208 aa14.22□□□□□ -0.13
TM6SF1-201ENST00000258909 MRPL27Q9P0M9 148 aaKnown RBP14.22□□□□□ -0.13
TM6SF1-201ENST00000258909 UFC1Q9Y3C8 167 aa14.22□□□□□ -0.13
TM6SF1-201ENST00000258909 IGHV3OR16-8A0A075B7F1 116 aa14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 CYB5BO43169 146 aa14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 SNAPC5O75971 98 aa14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 TNFAIP8O95379 198 aa14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 VBP1P61758 197 aa14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 THOC7Q6I9Y2 204 aaKnown RBP14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 UBAC2Q8NBM4 344 aa14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 GPX8Q8TED1 209 aa14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 LSM10Q969L4 123 aaKnown RBP14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 MARC2Q969Z3 335 aa14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 FUNDC2Q9BWH2 189 aa14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 ZNF436Q9C0F3 470 aaPredicted RBP14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 F11RQ9Y624 299 aaKnown RBP14.21□□□□□ -0.13
TM6SF1-201ENST00000258909 TSPAN5P62079 268 aa14.2□□□□□ -0.14
TM6SF1-201ENST00000258909 HSD17B13Q7Z5P4 300 aaPredicted RBP14.2□□□□□ -0.14
TM6SF1-201ENST00000258909 SCARB1Q8WTV0 552 aa14.2□□□□□ -0.14
TM6SF1-201ENST00000258909 TMEM190Q8WZ59 177 aa14.2□□□□□ -0.14
TM6SF1-201ENST00000258909 CHRDL1Q9BU40 450 aa14.2□□□□□ -0.14
TM6SF1-201ENST00000258909 SMIM31A0A1B0GVY4 71 aa14.19□□□□□ -0.14
TM6SF1-201ENST00000258909 ZNF207O43670 478 aaKnown RBP14.19□□□□□ -0.14
TM6SF1-201ENST00000258909 ELLP55199 621 aaPredicted RBP14.19□□□□□ -0.14
TM6SF1-201ENST00000258909 ANKRD55Q3KP44 614 aa14.19□□□□□ -0.14
TM6SF1-201ENST00000258909 TBC1D26Q86UD7 250 aa14.19□□□□□ -0.14
TM6SF1-201ENST00000258909 OR1L6Q8NGR2 347 aa14.19□□□□□ -0.14
TM6SF1-201ENST00000258909 C20orf24Q9BUV8 137 aa14.19□□□□□ -0.14
TM6SF1-201ENST00000258909 GGTLC1Q9BX51 225 aa14.19□□□□□ -0.14
TM6SF1-201ENST00000258909 C21orf62Q9NYP8 219 aa14.19□□□□□ -0.14
TM6SF1-201ENST00000258909 TRAV25A0A0B4J276 109 aa14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 F8W735 103 aaPredicted RBP14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 HPGDSO60760 199 aa14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 APOA1P02647 267 aa14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 ELK1P19419 428 aa14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 RNASE12Q5GAN4 147 aaKnown RBP14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 BSCL2Q96G97 398 aaPredicted RBP14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 UBQLN2Q9UHD9 624 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms