RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CA2P00918 260 aa22.34■■□□□ 1.17
CCM2-201ENST00000258781 ELLP55199 621 aaPredicted RBP22.34■■□□□ 1.17
CCM2-201ENST00000258781 PNKDQ8N490 385 aa22.34■■□□□ 1.17
CCM2-201ENST00000258781 OR1L8Q8NGR8 309 aa22.34■■□□□ 1.17
CCM2-201ENST00000258781 RCC1LQ96I51 464 aaKnown RBP22.34■■□□□ 1.17
CCM2-201ENST00000258781 COMMD5Q9GZQ3 224 aa22.34■■□□□ 1.17
CCM2-201ENST00000258781 ATRAIDQ6UW56 229 aa22.34■■□□□ 1.17
CCM2-201ENST00000258781 IGHV1-3A0A0C4DH29 117 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 INS-IGF2F8WCM5 200 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 LY6LH3BQJ8 138 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 SOX15O60248 233 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 ZNF726P1Q15940 193 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 GUCA2BQ16661 112 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 ACSM6Q6P461 480 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 KIR3DL3Q8N743 410 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 OR11H6Q8NGC7 330 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 NDUFA4L2Q9NRX3 87 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 INSIG2Q9Y5U4 225 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 KPTNQ9Y664 436 aa22.33■■□□□ 1.17
CCM2-201ENST00000258781 RBFOX3A6NFN3 312 aa22.32■■□□□ 1.16
CCM2-201ENST00000258781 ARF6P62330 175 aa22.32■■□□□ 1.16
CCM2-201ENST00000258781 RPEQ96AT9 228 aa22.32■■□□□ 1.16
CCM2-201ENST00000258781 NKX6-2Q9C056 277 aaPredicted RBP22.32■■□□□ 1.16
CCM2-201ENST00000258781 ANKRD17O75179 2603 aaKnown RBP22.32■■□□□ 1.16
CCM2-201ENST00000258781 PPT1P50897 306 aa22.32■■□□□ 1.16
CCM2-201ENST00000258781 KRTAP10-9P60411 292 aa22.32■■□□□ 1.16
CCM2-201ENST00000258781 PRB3Q04118 309 aaPredicted RBP22.32■■□□□ 1.16
CCM2-201ENST00000258781 BSXQ3C1V8 233 aa22.32■■□□□ 1.16
CCM2-201ENST00000258781 C1orf122Q6ZSJ8 110 aa22.32■■□□□ 1.16
CCM2-201ENST00000258781 FNDC10F2Z333 226 aa22.31■■□□□ 1.16
CCM2-201ENST00000258781 PRTN3P24158 256 aa22.31■■□□□ 1.16
CCM2-201ENST00000258781 FFAR4Q5NUL3 377 aa22.31■■□□□ 1.16
CCM2-201ENST00000258781 ZNF787Q6DD87 383 aa22.31■■□□□ 1.16
CCM2-201ENST00000258781 FASNP49327 2511 aaKnown RBP22.31■■□□□ 1.16
CCM2-201ENST00000258781 SMCO3A2RU48 225 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 ENSAO43768 121 aaKnown RBP22.3■■□□□ 1.16
CCM2-201ENST00000258781 IGHV2-5P01817 119 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 OPN1MWP04001 364 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 OPN1MW2P0DN77 364 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 OPN1MW3P0DN78 364 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 C2orf83Q53S99 150 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 HIST2H2BCQ6DN03 193 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 TREML4Q6UXN2 200 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 TEX45Q8NA69 505 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 APCP25054 2843 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 SNAPINO95295 136 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 BTN1A1Q13410 526 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 MOB3BQ86TA1 216 aa22.3■■□□□ 1.16
CCM2-201ENST00000258781 ZNF430Q9H8G1 570 aaPredicted RBP22.3■■□□□ 1.16
CCM2-201ENST00000258781 CSMD1Q96PZ7 3565 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 MAP1AP78559 2803 aaPredicted RBP22.29■■□□□ 1.16
CCM2-201ENST00000258781 IGHV3-72A0A0B4J1Y9 119 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 A0A1W2PN81 502 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 SLC25A17O43808 307 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 IGKV1D-33P01593 117 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 IGKV1-33P01594 117 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 CHRNA7P36544 502 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 HNF4GQ14541 408 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 ZNF506Q5JVG8 444 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 RPP25LQ8N5L8 163 aaKnown RBP22.29■■□□□ 1.16
CCM2-201ENST00000258781 CLDND2Q8NHS1 167 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 SLC35B3Q9H1N7 401 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 NPVFQ9HCQ7 196 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 ARHGAP32A7KAX9 2087 aa22.29■■□□□ 1.16
CCM2-201ENST00000258781 SSX7Q7RTT5 188 aa22.28■■□□□ 1.16
CCM2-201ENST00000258781 SUN5Q8TC36 379 aa22.28■■□□□ 1.16
CCM2-201ENST00000258781 SIRT7Q9NRC8 400 aa22.28■■□□□ 1.16
CCM2-201ENST00000258781 MAP1LC3B2A6NCE7 125 aa22.28■■□□□ 1.16
CCM2-201ENST00000258781 HTR1DP28221 377 aa22.28■■□□□ 1.16
CCM2-201ENST00000258781 TPTE2P1Q5T6R2 138 aa22.28■■□□□ 1.16
CCM2-201ENST00000258781 LCN15Q6UWW0 184 aa22.28■■□□□ 1.16
CCM2-201ENST00000258781 RITA1Q96K30 269 aa22.28■■□□□ 1.16
CCM2-201ENST00000258781 RARRES2Q99969 163 aa22.28■■□□□ 1.16
CCM2-201ENST00000258781 MAP1LC3BQ9GZQ8 125 aa22.28■■□□□ 1.16
CCM2-201ENST00000258781 ODF3BA8MYP8 253 aa22.27■■□□□ 1.16
CCM2-201ENST00000258781 RNASE2P10153 161 aaKnown RBP22.27■■□□□ 1.16
CCM2-201ENST00000258781 ARSJQ5FYB0 599 aaPredicted RBP22.27■■□□□ 1.16
CCM2-201ENST00000258781 OR10G4Q8NGN3 311 aa22.27■■□□□ 1.16
CCM2-201ENST00000258781 OR10G9Q8NGN4 311 aa22.27■■□□□ 1.16
CCM2-201ENST00000258781 OR10G7Q8NGN6 311 aa22.27■■□□□ 1.16
CCM2-201ENST00000258781 BPESC1Q9GZL8 116 aa22.27■■□□□ 1.16
CCM2-201ENST00000258781 UNKLQ9H9P5 680 aaKnown RBP22.27■■□□□ 1.16
CCM2-201ENST00000258781 KCNIP2Q9NS61 270 aa22.27■■□□□ 1.16
CCM2-201ENST00000258781 SLC39A9Q9NUM3 307 aa22.27■■□□□ 1.16
CCM2-201ENST00000258781 LSM4Q9Y4Z0 139 aaKnown RBP22.27■■□□□ 1.16
CCM2-201ENST00000258781 CTXND1A0A1B0GTU2 59 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 A0A1W2PPI3 338 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 OPRK1P41145 380 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 ATP5J2P56134 94 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 ERHP84090 104 aaKnown RBP22.26■■□□□ 1.15
CCM2-201ENST00000258781 ACOT6Q3I5F7 207 aaPredicted RBP22.26■■□□□ 1.15
CCM2-201ENST00000258781 RNF5Q99942 180 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 DPM3Q9P2X0 92 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 MED13LQ71F56 2210 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 CRYGBP07316 175 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 CEACAM3P40198 252 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 PMS2P11Q13670 270 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 HAGHQ16775 308 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 HCP5Q6MZN7 132 aa22.26■■□□□ 1.15
CCM2-201ENST00000258781 OR10W1Q8NGF6 305 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms