RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 B2MP61769 119 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 MZT1Q08AG7 82 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 GAMTQ14353 236 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 SPSB3Q6PJ21 355 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 SPNS3Q6ZMD2 512 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 LRTM2Q8N967 370 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 OR4S2Q8NH73 311 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 IDI2-AS1Q9NZ38 188 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 FCN3O75636 299 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 ARL14EPLP0DKL9 152 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 OR10J1P30954 320 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 CDC34P49427 236 aaPredicted RBP7.44□□□□□ -1.22
CKAP2-201ENST00000258607 GNB2P62879 340 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 HIST2H2BDQ6DRA6 164 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 LINC00596Q86U02 117 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 SAT2Q96F10 170 aaPredicted RBP7.44□□□□□ -1.22
CKAP2-201ENST00000258607 NPCDR1Q9BY65 106 aa7.44□□□□□ -1.22
CKAP2-201ENST00000258607 NIPBLQ6KC79 2804 aaeCLIP7.44□□□□□ -1.22
CKAP2-201ENST00000258607 APOA2P02652 100 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 ADH4P08319 380 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 MMDQ15546 238 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 RTL8BQ17RB0 113 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 Q8NFD4 153 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 TMEM37Q8WXS4 190 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 RPEQ96AT9 228 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 INSIG2Q9Y5U4 225 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 PXMP4Q9Y6I8 212 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 TRAV34A0A0B4J273 112 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 C1orf196B1AJZ1 125 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 CT45A6P0DMU7 189 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 CT45A5P0DMU8 189 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 CT45A7P0DMV0 189 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 ICAM4Q14773 271 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 FXYD3Q14802 87 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 PSG5Q15238 335 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 ZNF672Q499Z4 452 aaPredicted RBP7.43□□□□□ -1.22
CKAP2-201ENST00000258607 SLC24A4Q8NFF2 622 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 FLYWCH2Q96CP2 140 aaKnown RBP7.43□□□□□ -1.22
CKAP2-201ENST00000258607 SEC11CQ9BY50 192 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 PPIAL4CA0A0B4J2A2 164 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 C15orf62A8K5M9 175 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 SHISA9B4DS77 424 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 TMEM178BH3BS89 294 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 IFNL4K9M1U5 179 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 HPRT1P00492 218 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 RBP4P02753 201 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 PPIAL4GP0DN37 164 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 FABP9Q0Z7S8 132 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 GFI1BQ5VTD9 330 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 ASB13Q8WXK3 278 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 NPIPB3Q92617 1050 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 LINC00479Q96M42 142 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 HES4Q9HCC6 221 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 SMCO4Q9NRQ5 59 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 KIAA1456Q9P272 454 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 MSRB2Q9Y3D2 182 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 KPTNQ9Y664 436 aa7.43□□□□□ -1.22
CKAP2-201ENST00000258607 IGHV3-66A0A0C4DH42 116 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 C11orf94C9JXX5 98 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 FCN1O00602 326 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 AREGP15514 252 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 ZNF90Q03938 601 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 OR5I1Q13606 314 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 RNF212Q495C1 297 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 TPPP3Q9BW30 176 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 IGLV3-9A0A075B6K5 115 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 A0A1B0GUS0 222 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 TRGC2P03986 189 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 PYYP10082 97 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 PSMB3P49720 205 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 PRSS8Q16651 343 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 ZNF788Q6ZQV5 615 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 MIR17HGQ75NE6 70 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 ZNF561Q8N587 486 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 LURAP1Q96LR2 239 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 TMEM147Q9BVK8 224 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 MXRA5Q9NR99 2828 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 A0A1W2PPR1 153 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 SLC17A3O00476 420 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 CA1P00915 261 aaPredicted RBP7.42□□□□□ -1.22
CKAP2-201ENST00000258607 ACAA1P09110 424 aaPredicted RBP7.42□□□□□ -1.22
CKAP2-201ENST00000258607 CXCL1P09341 107 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 OR1B1Q8NGR6 318 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 NANPQ8TBE9 248 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 JPT1Q9UK76 154 aa7.42□□□□□ -1.22
CKAP2-201ENST00000258607 C19orf84I3L1E1 186 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 LYL1P12980 280 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 RND2P52198 227 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 RANP62826 216 aaKnown RBP7.41□□□□□ -1.22
CKAP2-201ENST00000258607 SUMO1P63165 101 aaKnown RBP7.41□□□□□ -1.22
CKAP2-201ENST00000258607 ADORA2A-AS1P86434 159 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 BRD3OSQ6XYD6 125 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 DUX5Q96PT3 197 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 MUC21A0A0G2JKD1 596 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 MUC21A0A140T8X8 626 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 SRP19P09132 144 aaKnown RBP7.41□□□□□ -1.22
CKAP2-201ENST00000258607 BCL2P10415 239 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 CD33P20138 364 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 LMO1P25800 156 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 APOBEC3AP31941 199 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms