RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 RAB39BQ96DA2 213 aa10.87□□□□□ -0.67
USP5-201ENST00000229268 COMMD5Q9GZQ3 224 aa10.87□□□□□ -0.67
USP5-201ENST00000229268 INSIG2Q9Y5U4 225 aa10.87□□□□□ -0.67
USP5-201ENST00000229268 PUS1Q9Y606 427 aaKnown RBP eCLIP10.87□□□□□ -0.67
USP5-201ENST00000229268 CA2P00918 260 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 DEFA6Q01524 100 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 FFAR4Q5NUL3 377 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 UQCC3Q6UW78 93 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 NEIL1Q96FI4 390 aaPredicted RBP10.86□□□□□ -0.67
USP5-201ENST00000229268 ADTRPQ96IZ2 230 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 PCGF1Q9BSM1 259 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 KAAG1Q9UBP8 84 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 C15orf61A6NNL5 157 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 IGKV1D-33P01593 117 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 IGKV1-33P01594 117 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 DVL1P1P54792 670 aaPredicted RBP10.86□□□□□ -0.67
USP5-201ENST00000229268 HSPE1P61604 102 aaKnown RBP10.86□□□□□ -0.67
USP5-201ENST00000229268 PLEKHA3Q9HB20 300 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 CARHSP1Q9Y2V2 147 aaKnown RBP10.86□□□□□ -0.67
USP5-201ENST00000229268 ZANQ9Y493 2812 aa10.86□□□□□ -0.67
USP5-201ENST00000229268 RBFOX2O43251 390 aaKnown RBP eCLIP10.85□□□□□ -0.679e-7■■■■□ 24.6
USP5-201ENST00000229268 CD1BP29016 333 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 KIR2DS2P43631 304 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 PPOXP50336 477 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 ACSM6Q6P461 480 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 FAM24BQ8N5W8 94 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 RPEQ96AT9 228 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 TMEM147Q9BVK8 224 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 NCOR1P1Q9H4R4 102 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 SLC39A9Q9NUM3 307 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 UMAD1C9J7I0 102 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 GATA2P23769 480 aaPredicted RBP10.85□□□□□ -0.67
USP5-201ENST00000229268 TLE4Q04727 773 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 PDZD11Q5EBL8 140 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.85□□□□□ -0.67
USP5-201ENST00000229268 TMEM170AQ8WVE7 144 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 RCC1LQ96I51 464 aaKnown RBP10.85□□□□□ -0.67
USP5-201ENST00000229268 NABP2Q9BQ15 211 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 NPY1RP25929 384 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 RAB5CP51148 216 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 DLX6P56179 175 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 HES1Q14469 280 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 PLGLAQ15195 96 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 ZNF726P1Q15940 193 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 ZNF787Q6DD87 383 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 HCP5Q6MZN7 132 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 SPSB3Q6PJ21 355 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 ZNF833PQ6ZTB9 187 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 LHFPL4Q7Z7J7 247 aa10.85□□□□□ -0.67
USP5-201ENST00000229268 LOC105371242A0A075B767 164 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 ACTL6BO94805 426 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 KBTBD11O94819 623 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 SNRPCP09234 159 aaKnown RBP10.84□□□□□ -0.67
USP5-201ENST00000229268 LGALS4P56470 323 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 PYY3Q5JQD4 70 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 C10orf91Q5T1B1 145 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 MIC13Q5XKP0 118 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 RPP25LQ8N5L8 163 aaKnown RBP10.84□□□□□ -0.67
USP5-201ENST00000229268 SLC24A4Q8NFF2 622 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 SSBP3Q9BWW4 388 aaPredicted RBP10.84□□□□□ -0.67
USP5-201ENST00000229268 SEC11CQ9BY50 192 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 PRO1933Q9H354 126 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 DOPEY2Q9Y3R5 2298 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 TEX50A0A1B0GTY4 177 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 PMS2P5A8MQ11 134 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 KIAA0141Q14154 515 aaPredicted RBP10.84□□□□□ -0.67
USP5-201ENST00000229268 SSX2Q16385 188 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 C11orf71Q6IPW1 123 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 OR10A7Q8NGE5 316 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 CLEC7AQ9BXN2 247 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 NPCDR1Q9BY65 106 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 BPESC1Q9GZL8 116 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 LINC00574Q9H8X3 128 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 NOTCH2Q04721 2471 aa10.84□□□□□ -0.67
USP5-201ENST00000229268 IGHV3OR16-10A0A075B7F0 116 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 RBFOX3A6NFN3 312 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 FAM157AC9JC47 383 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 UPK2O00526 184 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 BTF3P20290 206 aaKnown RBP10.83□□□□□ -0.68
USP5-201ENST00000229268 PDLIM3Q53GG5 364 aaPredicted RBP10.83□□□□□ -0.68
USP5-201ENST00000229268 OR10G4Q8NGN3 311 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 OR10G9Q8NGN4 311 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 OR10G7Q8NGN6 311 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 OR4C13Q8NGP0 309 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 GATAD1Q8WUU5 269 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 ACY3Q96HD9 319 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 LIPFP07098 398 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 ZFP36P26651 326 aaKnown RBP10.83□□□□□ -0.68
USP5-201ENST00000229268 VDAC2P45880 294 aaPredicted RBP10.83□□□□□ -0.68
USP5-201ENST00000229268 RAB11AP62491 216 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 RPL8P62917 257 aaKnown RBP10.83□□□□□ -0.68
USP5-201ENST00000229268 TMEM186Q96B77 213 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 C14orf144Q96I85 54 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 PBDC1Q9BVG4 233 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 SMCO4Q9NRQ5 59 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 MAP1LC3B2A6NCE7 125 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 ITGB1BP1O14713 200 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 CD5P06127 495 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 PRRX1P54821 245 aa10.83□□□□□ -0.68
USP5-201ENST00000229268 UBE2G2P60604 165 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms