RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Mrm2Q9CPY0 246 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rer1Q9CQU3 196 aaKnown RBP10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Plp2Q9R1Q7 152 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fgf14P70379 247 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Kdm4dQ3U2K5 510 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fam57aQ5ND56 257 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Zfp92Q62396 488 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Zfp933Q6PEE4 468 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Znf768Q8R0T2 568 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rcc1Q8VE37 421 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr76Q8VFV2 317 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr1230Q8VG58 305 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Wdr13Q91V09 485 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ifitm3Q9CQW9 137 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 F8Q06194 2319 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tnfaip6O08859 275 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Slc25a17O70579 307 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ren1P06281 402 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Srp14P16254 110 aaKnown RBP10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ablim3Q69ZX8 682 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Igkv1-131A0A140T8M8 120 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Acp1Q9D358 158 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 D130052B06RikQ3UW13 202 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Pitpnc1Q8K4R4 332 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rhbdd2Q8VEK2 361 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr1243Q8VGM7 305 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 NubplQ9CWD8 319 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ldb3Q9JKS4 723 aaKnown RBP10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Efnb2P52800 336 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Mfsd4b3Q3UN21 355 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr205Q7TS37 305 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr1330Q8VEY6 315 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Vmn1r177E9PXM3 309 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Vmn1r167G3UW71 315 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Lgals9O08573 353 aaKnown RBP10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 EomesO54839 707 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Wnt1P04426 370 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 TigitP86176 249 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr702Q920Z2 318 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ca15Q99N23 324 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr951Q9EQ94 314 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Sptbn2Q68FG2 2388 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Polr2gP62488 172 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm5150Q1AN92 299 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Mpzl1Q3TEW6 270 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Chst1Q9EQC0 411 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Vmn1r91E9PZR7 307 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gpm6bP35803 328 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tnfsf18Q7TS55 173 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 MetrnQ8C1Q4 291 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tpsb2P21845 276 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Crisp3Q03402 241 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 CtsoQ8BM88 312 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Trav5-1A0A075B5Z7 114 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 PtgfrP43117 366 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Zic1P46684 447 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Cops9Q3U898 57 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr577Q8VH11 312 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr632Q9EPN9 317 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr972Q9EQA2 314 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm45623A0A1B0GSF6 103 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ajm1A2AJA9 974 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr978E9Q985 311 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Klf16P58334 251 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ctsll3Q3ULP7 331 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Slc6a8Q8VBW1 640 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr934Q9EQ87 310 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Klf5Q9Z0Z7 446 aaKnown RBP10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Znf703P0CL69 594 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 S1pr5Q91X56 400 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Cds2Q99L43 444 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Klrc3Q9QXN7 221 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 P01670 111 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 P01671 111 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 P01672 111 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Trav5d-4Q5R1F6 114 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 YbeyQ8CAV0 164 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Lrrc10Q8K3W2 274 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 4930553M12RikQ9CUH1 165 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fbxo25Q9D2Y6 357 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 SelenofQ9ERR7 162 aa10.55□□□□□ -0.72
Trim56-201ENSMUST00000054384 Col22a1E9Q7P1 1613 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr1118A0A0J9YUE7 307 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Sssca1P56873 199 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rps4xP62702 263 aaKnown RBP10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Oas1bQ60856 376 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Prg2Q61878 223 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Cbln2Q8BGU2 224 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr828Q8VFM8 312 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Shisa5Q9D7I0 235 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fbxl6Q9QXW0 535 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Cacna1eQ61290 2272 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fam189a1Q6A044 515 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tmem230Q8CIB6 120 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ccdc198Q9CPZ1 294 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Xrcc2Q9CX47 278 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 HcstQ9QUJ0 79 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Mex3aG3UYU0 520 aaKnown RBP10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fcn2O70497 314 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Atad5Q4QY64 1826 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms