RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Igkv1-135A0A0B4J1H7 120 aa19.26■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Wnt2bO70283 389 aa19.26■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Mdh2P08249 338 aaKnown RBP19.26■□□□□ 0.67
Upf3a-201ENSMUST00000043767 BC147527Q3V185 167 aa19.26■□□□□ 0.67
Upf3a-201ENSMUST00000043767 AbraclQ4KML4 81 aa19.26■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gnb3Q61011 340 aa19.26■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Olfr133Q8VG94 312 aa19.26■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Tspan4Q9DCK3 238 aa19.26■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Chst5Q9QUP4 395 aa19.26■□□□□ 0.67
Upf3a-201ENSMUST00000043767 9830107B12RikD3Z5D6 160 aa19.25■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Olfr69E9Q7C5 316 aa19.25■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gpr33O88416 339 aa19.25■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Tmem71Q149F5 287 aa19.25■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Ang4Q3TMQ6 144 aa19.25■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Fbxo27Q6DIA9 280 aa19.25■□□□□ 0.67
Upf3a-201ENSMUST00000043767 MavsQ8VCF0 503 aa19.25■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Ms4a4dQ99N05 225 aa19.25■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Zcchc24B2RVL6 241 aaKnown RBP19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gm15130F6PYN5 206 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Olfr1471F6QVZ8 314 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Csf3P09920 208 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Pdcd6P12815 191 aaKnown RBP19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Asgr2P24721 301 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Hide1Q75VT8 222 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Rsl1Q7M6Y1 485 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Fbxo36Q9CQ24 188 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Fbxw4Q9JMJ2 410 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gm36368A0A1D5RLK8 91 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Olfr267A2AM35 313 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Hist1h1dP43277 221 aaKnown RBP19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Pax6P63015 422 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gpr55Q3UJF0 327 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gm10645Q3UPY1 145 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Wdr82Q8BFQ4 313 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Parp11Q8CFF0 331 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Poldip2Q91VA6 368 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Teddm3Q9CQH1 294 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Zfand6Q9DCH6 223 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Myoz1Q9JK37 296 aa19.24■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Zfp160E9Q459 650 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Cd7P50283 210 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Htr2bQ02152 479 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Ccl7Q03366 97 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gm10192Q3V0S1 108 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Glra1Q64018 457 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Fam234aQ8C0Z1 555 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Olfr50Q8VGK5 312 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Ssna1Q9JJ94 119 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Ntn3Q9R1A3 580 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gm13547A2ARC0 163 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Cd5P13379 494 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Evx1P23683 416 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gm10384Q3UQ87 92 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gls2Q571F8 602 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Phox2aQ62066 280 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Rhbdd1Q8BHC7 315 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Slc17a5Q8BN82 495 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Bricd5Q8BV89 174 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Rep15Q9D7T1 230 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Crim1Q9JLL0 1037 aa19.23■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Csmd2V9GX34 3611 aa19.22■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Cdkn1bP46414 197 aa19.22■□□□□ 0.67
Upf3a-201ENSMUST00000043767 StomP54116 284 aa19.22■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gpr84Q8CIM5 396 aa19.22■□□□□ 0.67
Upf3a-201ENSMUST00000043767 CrhQ8CIT0 187 aa19.22■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Commd1Q8K4M5 188 aa19.22■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Olfr279Q8VFD8 310 aa19.22■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Iqcf5Q9DAL7 148 aa19.22■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Bcl2l10Q9Z0F3 191 aa19.22■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Cmya5Q70KF4 3739 aa19.22■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Vmn1r80L7N1Z3 308 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 BC117090L7N257 96 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 H3f3cP02301 136 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Ccl11P48298 97 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 BaxQ07813 192 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 A3galt2Q3V1N9 370 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Ewsr1Q61545 655 aaKnown RBP19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Dlx1Q64317 255 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Timm21Q8CCM6 249 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Olfr945Q9EQB5 319 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Clec6aQ9JKF4 209 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 SclyQ9JLI6 432 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Hils1Q9QYL0 170 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Egr4Q9WUF2 478 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Hcfc1Q61191 2045 aaKnown RBP19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Tmem200bD3Z0P8 284 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Gm6665F6Y363 85 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Tnfsf10P50592 291 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Rtl6Q505G4 243 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Pramel5Q7TPY4 500 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 JkampQ8BI36 311 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Rbm39Q8VH51 530 aaKnown RBP19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Med6Q921D4 246 aaKnown RBP19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Sapcd1Q9CY86 146 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Aurkaip1Q9DCJ7 200 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 Cldn10Q9Z0S6 231 aa19.21■□□□□ 0.67
Upf3a-201ENSMUST00000043767 DscamQ9ERC8 2013 aa19.2■□□□□ 0.66
Upf3a-201ENSMUST00000043767 CadB2RQC6 2225 aa19.2■□□□□ 0.66
Upf3a-201ENSMUST00000043767 Tspan15F7BWT7 294 aa19.2■□□□□ 0.66
Upf3a-201ENSMUST00000043767 Olfr905L7N1X5 310 aa19.2■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms