RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Zdhhc23Q5Y5T3 425 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Zfp429Q7M6Y0 485 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr876Q7TRE4 310 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr875Q7TRE5 310 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Il34Q8R1R4 235 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Serpinb1bQ8VHP7 382 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ubtd1Q91WB7 227 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Magt1Q9CQY5 335 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Stpg1Q9D2F5 341 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Lrrc3cA0A1B0GRI5 255 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm14597A2CFG5 200 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Phb2O35129 299 aaKnown RBP7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 St8sia2O35696 375 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Rpl29P47915 160 aaKnown RBP7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gimap1P70224 277 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 AmbpQ07456 349 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Zfp72Q0VFY0 435 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Taar3Q5QD16 343 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Scrt2Q8BTH6 311 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Cmc2Q8K199 79 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1388Q8VFA3 311 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1384Q8VFA8 318 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1408Q8VG32 310 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Scrt1Q99M85 348 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Chst1Q9EQC0 411 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 St6galnac5Q9QYJ1 336 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 MthfrQ9WU20 654 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm3550W4VSN7 160 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Nbeal1E9PYP2 2688 aa7.27□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ttc28Q80XJ3 2450 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ighv9-2A0A0B4J1J4 117 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Sult6b2B7ZWN4 290 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm7233E9PZI8 198 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm9732F6QVC4 198 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm20481G3UXK4 153 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm21972J3QN38 98 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm8104K7N744 198 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Bcl2l11O54918 196 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Hbb-bh1P04444 147 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rag2P21784 527 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tnfrsf1aP25118 454 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rims4P60191 269 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Zfp936Q3ULA8 456 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm10840Q3V2K9 103 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Glt8d1Q6NSU3 371 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Fam122bQ6NZE7 255 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Fam76bQ80XP8 339 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Fam169bQ8CHT6 337 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Vmn1r36Q8R2E3 305 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Arrdc1Q99KN1 434 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 GhsrQ99P50 364 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Wdr20Q9D5R2 567 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tmem126aQ9D8Y1 196 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 NgbQ9ER97 151 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr587-ps1A0A1B0GSS1 159 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm5286E0CXI6 357 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 P01723 117 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Mdh2P08249 338 aaKnown RBP7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 CrpP14847 225 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Slc6a1P31648 599 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Aldh3a2P47740 484 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Atp5iQ06185 71 aaKnown RBP7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Q3U595 105 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Q3UUX7 111 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Sec14l4Q8R0F9 403 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr134Q8VG95 312 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr156Q8VGA9 318 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Cacng8Q8VHW2 423 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tmbim7Q9D592 302 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 Hnf4gQ9WUU6 408 aa7.27□□□□□ -1.25
Trim39-201ENSMUST00000042717 TracA0A075B662 137 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 1700025B11RikA0A087WNZ6 93 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm29049A0A087WSM5 227 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm45808A0A1B0GSH8 263 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1406E9Q8X1 310 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Esp34G3UXG0 151 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm21118J3QPK8 227 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 MosP00536 390 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Sstr2P30875 369 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ppp1ccP63087 323 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Supt4h1aP63271 117 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm20909Q5FWB5 227 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm20852Q5M8R5 227 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Fxyd3Q61835 88 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm20917Q62457 227 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm20809Q62458 227 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm20865Q62460 227 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1212Q7TR08 311 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr25Q7TRD6 313 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr859Q7TRF5 309 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr358Q7TRY5 330 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm20738Q810R8 227 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 JkampQ8BI36 311 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 WrbQ8K0D7 174 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 MrgprfQ8VCJ6 343 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1269Q8VEZ2 309 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1265Q8VEZ3 309 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Lamtor1Q9CQ22 161 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Arv1Q9D0U9 266 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 PipoxQ9D826 390 aa7.26□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms