RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 HSPB9Q9BQS6 159 aa9.74□□□□□ -0.85
LINC00339-213ENST00000642137 COMMD5Q9GZQ3 224 aa9.74□□□□□ -0.85
LINC00339-213ENST00000642137 C16orf95Q9H693 158 aa9.74□□□□□ -0.85
LINC00339-213ENST00000642137 ZNF702PQ9H963 129 aa9.74□□□□□ -0.85
LINC00339-213ENST00000642137 TMEM14BQ9NUH8 114 aa9.74□□□□□ -0.85
LINC00339-213ENST00000642137 CACNG5Q9UF02 275 aa9.74□□□□□ -0.85
LINC00339-213ENST00000642137 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
LINC00339-213ENST00000642137 ZNF257Q9Y2Q1 563 aa9.74□□□□□ -0.85
LINC00339-213ENST00000642137 OR51B2Q9Y5P1 312 aa9.74□□□□□ -0.85
LINC00339-213ENST00000642137 LINC01548A6NM66 108 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 RBMXL2O75526 392 aaKnown RBP9.73□□□□□ -0.85
LINC00339-213ENST00000642137 NDUFA7O95182 113 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 RPL27AP46776 148 aaKnown RBP9.73□□□□□ -0.85
LINC00339-213ENST00000642137 COMPP49747 757 aaPredicted RBP9.73□□□□□ -0.85
LINC00339-213ENST00000642137 C2orf68Q2NKX9 166 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 THOC7Q6I9Y2 204 aaKnown RBP9.73□□□□□ -0.85
LINC00339-213ENST00000642137 GSG1LQ6UXU4 331 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 OR1L8Q8NGR8 309 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 OR5B3Q8NH48 314 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 OR10C1Q96KK4 312 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 C2orf50Q96LR7 162 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 TMEM68Q96MH6 324 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 MED28Q9H204 178 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 ZNF580Q9UK33 172 aa9.73□□□□□ -0.85
LINC00339-213ENST00000642137 TET2Q6N021 2002 aaPredicted RBP9.73□□□□□ -0.85
LINC00339-213ENST00000642137 C13orf42A0A1B0GVH6 325 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 C5orf51A6NDU8 294 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 MSGN1A6NI15 193 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 MPTX1A8MV57 137 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 E7EUB6 86 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 ST8SIA3O43173 380 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 IGF1P05019 195 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 TRAPPC2P0DI81 140 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 TRAPPC2BP0DI82 140 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 EGR2P11161 476 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-213ENST00000642137 CRIP2P52943 208 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-213ENST00000642137 RRAS2P62070 204 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-213ENST00000642137 GNB1P62873 340 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 TMEM267Q0VDI3 215 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-213ENST00000642137 IAH1Q2TAA2 248 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-213ENST00000642137 PDLIM3Q53GG5 364 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-213ENST00000642137 AKIRIN2Q53H80 203 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 OR1S1Q8NH92 325 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 SGMS2Q8NHU3 365 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 SRSF12Q8WXF0 261 aaKnown RBP9.72□□□□□ -0.85
LINC00339-213ENST00000642137 ARPC1AQ92747 370 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 SRSF8Q9BRL6 282 aaKnown RBP9.72□□□□□ -0.85
LINC00339-213ENST00000642137 PDCD10Q9BUL8 212 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 QTRT1Q9BXR0 403 aaKnown RBP9.72□□□□□ -0.85
LINC00339-213ENST00000642137 NDUFA4L2Q9NRX3 87 aa9.72□□□□□ -0.85
LINC00339-213ENST00000642137 CGB1A6NKQ9 187 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 FAM25EA8MYX2 175 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 FAM90A26D6RGX4 464 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 AP4M1O00189 453 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 CCSO14618 274 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 GOSR2O14653 212 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 IFNA17P01571 189 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 HKR1P10072 659 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 MYOD1P15172 320 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 OR2B8PP59922 312 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 SPCS3P61009 180 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 CYCSP99999 105 aaKnown RBP9.71□□□□□ -0.86
LINC00339-213ENST00000642137 ID3Q02535 119 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 ARSJQ5FYB0 599 aaPredicted RBP9.71□□□□□ -0.86
LINC00339-213ENST00000642137 HSD17B13Q7Z5P4 300 aaPredicted RBP9.71□□□□□ -0.86
LINC00339-213ENST00000642137 PRIMA1Q86XR5 153 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 ZBTB8BQ8NAP8 495 aaPredicted RBP9.71□□□□□ -0.86
LINC00339-213ENST00000642137 OR4D5Q8NGN0 318 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 OR5M8Q8NGP6 311 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 OR2T6Q8NHC8 308 aa9.71□□□□□ -0.86
LINC00339-213ENST00000642137 A0A1W2PN81 502 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 HMX3A6NHT5 357 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 INS-IGF2F8WCM5 200 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 ATP6V0E1O15342 81 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 MED6O75586 246 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 OPN1MWP04001 364 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 OPN1MW2P0DN77 364 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 OPN1MW3P0DN78 364 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 CHRNA7P36544 502 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 VDAC2P45880 294 aaPredicted RBP9.7□□□□□ -0.86
LINC00339-213ENST00000642137 NDPQ00604 133 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 PRCDQ00LT1 54 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 SRSF2Q01130 221 aaKnown RBP9.7□□□□□ -0.86
LINC00339-213ENST00000642137 SRSF4Q08170 494 aaKnown RBP9.7□□□□□ -0.86
LINC00339-213ENST00000642137 IL15RAQ13261 267 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 FCN2Q15485 313 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 C10orf55Q5SWW7 151 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 OR4F5Q8NH21 305 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 ABHD5Q8WTS1 349 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 FYTTD1Q96QD9 318 aaKnown RBP9.7□□□□□ -0.86
LINC00339-213ENST00000642137 GON7Q9BXV9 100 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 NMES1Q9C002 83 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 PARP11Q9NR21 331 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 SERTAD4Q9NUC0 356 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 GSKIPQ9P0R6 139 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 MGAT4CQ9UBM8 478 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 HSPB7Q9UBY9 170 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 FBXO7Q9Y3I1 522 aa9.7□□□□□ -0.86
LINC00339-213ENST00000642137 A0A1B0GUS0 222 aa9.69□□□□□ -0.86
LINC00339-213ENST00000642137 A0A1B0GW64 132 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms