RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 H2BFWTQ7Z2G1 175 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 FAM219AQ8IW50 185 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 PUSL1Q8N0Z8 303 aaKnown RBP7.46□□□□□ -1.22
PHGDH-228ENST00000641847 CADM3Q8N126 398 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 NPBQ8NG41 125 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 OR11H7Q8NGC8 314 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 OR8H1Q8NGG4 311 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 VSTM2AQ8TAG5 236 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 SSMEM1Q8WWF3 244 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 GPR146Q96CH1 333 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 SPIN2AQ99865 258 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 SPIN2BQ9BPZ2 258 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 SLC25A33Q9BSK2 321 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 CHIAQ9BZP6 476 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 TPSG1Q9NRR2 321 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 PITPNC1Q9UKF7 332 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 VPREB3Q9UKI3 123 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 MOB4Q9Y3A3 225 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 TRAV3A0A0B4J244 114 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 C13orf42A0A1B0GVH6 325 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 C5orf51A6NDU8 294 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 NCBP2LA6PVI3 153 aaKnown RBP7.45□□□□□ -1.22
PHGDH-228ENST00000641847 UPK2O00526 184 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 RRHO14718 337 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 CHST1O43916 411 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 OR2A4O95047 310 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 SIX6O95475 246 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 CRYGBP07316 175 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 HLA-GP17693 338 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 CXCL3P19876 107 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 BCAP31P51572 246 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 SMCO1Q147U7 214 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 IAH1Q2TAA2 248 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-228ENST00000641847 GSG1LQ6UXU4 331 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 C16orf82Q7Z2V1 217 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 TEX45Q8NA69 505 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 OR4A16Q8NH70 328 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 OR4A5Q8NH83 315 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 LINC01006Q8NI28 216 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 TMEM167AQ8TBQ9 72 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 OR10C1Q96KK4 312 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 WWC2-AS2Q96NR7 200 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 RBM14Q96PK6 669 aaKnown RBP7.45□□□□□ -1.22
PHGDH-228ENST00000641847 OR2A7Q96R45 310 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 PDCD10Q9BUL8 212 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 FBXL15Q9H469 300 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 RANBP3Q9H6Z4 567 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-228ENST00000641847 ZNF430Q9H8G1 570 aaPredicted RBP7.45□□□□□ -1.22
PHGDH-228ENST00000641847 PLSCR3Q9NRY6 295 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 BET1LQ9NYM9 111 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 CACNG5Q9UF02 275 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 NSG2Q9Y328 171 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 SIGLEC9Q9Y336 463 aa7.45□□□□□ -1.22
PHGDH-228ENST00000641847 EPPK1P58107 5090 aaKnown RBP7.45□□□□□ -1.22
PHGDH-228ENST00000641847 NOTCH3Q9UM47 2321 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 A0A1B0GU03 582 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 HMX3A6NHT5 357 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 C15orf61A6NNL5 157 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 RBMXL2O75526 392 aaKnown RBP7.44□□□□□ -1.22
PHGDH-228ENST00000641847 SNAPC5O75971 98 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 TRAPPC2P0DI81 140 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 TRAPPC2BP0DI82 140 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 SLC25A6P12236 298 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 H2BFSP57053 126 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 PROK1P58294 105 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 KRTAP10-3P60369 221 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 PRSS8Q16651 343 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 C5orf64Q2M2E5 130 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 Q6ZRM9 215 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 FOXRED2Q8IWF2 684 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 FAM71E2Q8N5Q1 922 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 C5orf56Q8N8D9 126 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 Q8N9W7 124 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 ZBTB8BQ8NAP8 495 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-228ENST00000641847 OR1S1Q8NH92 325 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 CLCC1Q96S66 551 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 ZNF436Q9C0F3 470 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-228ENST00000641847 PRNDQ9UKY0 176 aa7.44□□□□□ -1.22
PHGDH-228ENST00000641847 SH2D7A6NKC9 451 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-228ENST00000641847 FGF16O43320 207 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 NXPH3O95157 252 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 SCGB1D2O95969 90 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 CA2P00918 260 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 IL6RP08887 468 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-228ENST00000641847 MYOD1P15172 320 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 GNB1P62873 340 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 RPL8P62917 257 aaKnown RBP7.43□□□□□ -1.22
PHGDH-228ENST00000641847 CD83Q01151 205 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 PJVKQ0ZLH3 352 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 MRGPRG-AS1Q2M3A8 158 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 C10orf55Q5SWW7 151 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 PPP1R27Q86WC6 154 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 MMD2Q8IY49 270 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 OR4D5Q8NGN0 318 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 CHAC2Q8WUX2 184 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 C2orf50Q96LR7 162 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 RASL11BQ9BPW5 248 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 QTRT1Q9BXR0 403 aaKnown RBP7.43□□□□□ -1.22
PHGDH-228ENST00000641847 COA4Q9NYJ1 87 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 GSKIPQ9P0R6 139 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms