RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 APOA2P02652 100 aa14.55□□□□□ -0.08
PHGDH-226ENST00000641756 IL6RP08887 468 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-226ENST00000641756 NPY1RP25929 384 aa14.55□□□□□ -0.08
PHGDH-226ENST00000641756 RAB24Q969Q5 203 aa14.55□□□□□ -0.08
PHGDH-226ENST00000641756 NDUFA2O43678 99 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 AVPI1Q5T686 147 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 FAM90A2PQ658T7 463 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 IQCF2Q8IXL9 164 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 HIST1H2BAQ96A08 127 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 HARBI1Q96MB7 349 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 VAX2Q9UIW0 290 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 ANKHD1Q8IWZ3 2542 aaKnown RBP14.54□□□□□ -0.08
PHGDH-226ENST00000641756 KBTBD11O94819 623 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 IFNA1P01562 189 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 DLX1P56177 255 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 DLK1P80370 383 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 PRB3Q04118 309 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-226ENST00000641756 GATAD1Q8WUU5 269 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 MGST2Q99735 147 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 NIPSNAP3BQ9BS92 247 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 COL6A6A6NMZ7 2263 aa14.54□□□□□ -0.08
PHGDH-226ENST00000641756 IGHV1-8P0DP01 117 aa14.53□□□□□ -0.08
PHGDH-226ENST00000641756 TAGLN2P37802 199 aaKnown RBP14.53□□□□□ -0.08
PHGDH-226ENST00000641756 FLI1Q01543 452 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-226ENST00000641756 ACOT6Q3I5F7 207 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-226ENST00000641756 ZFP82Q8N141 532 aa14.53□□□□□ -0.08
PHGDH-226ENST00000641756 TVP23CQ96ET8 276 aa14.53□□□□□ -0.08
PHGDH-226ENST00000641756 GGACTQ9BVM4 153 aa14.53□□□□□ -0.08
PHGDH-226ENST00000641756 PLEKHA3Q9HB20 300 aa14.53□□□□□ -0.08
PHGDH-226ENST00000641756 TEX50A0A1B0GTY4 177 aa14.53□□□□□ -0.08
PHGDH-226ENST00000641756 ARSJQ5FYB0 599 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-226ENST00000641756 C11orf42Q8N5U0 333 aa14.53□□□□□ -0.08
PHGDH-226ENST00000641756 OR5AN1Q8NGI8 311 aa14.53□□□□□ -0.08
PHGDH-226ENST00000641756 NABP2Q9BQ15 211 aa14.53□□□□□ -0.08
PHGDH-226ENST00000641756 BET1LQ9NYM9 111 aa14.53□□□□□ -0.08
PHGDH-226ENST00000641756 TNCP24821 2201 aa14.52□□□□□ -0.08
PHGDH-226ENST00000641756 ZNF727A8MUV8 499 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 CYB5BO43169 146 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 LY6HO94772 140 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 PAX6P26367 422 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 CDC34P49427 236 aaPredicted RBP14.52□□□□□ -0.09
PHGDH-226ENST00000641756 PRCDQ00LT1 54 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 MIC13Q5XKP0 118 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 RBMS3Q6XE24 437 aaKnown RBP14.52□□□□□ -0.09
PHGDH-226ENST00000641756 FAM24BQ8N5W8 94 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 LINC00311Q8N616 119 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 OSR1Q8TAX0 266 aaPredicted RBP14.52□□□□□ -0.09
PHGDH-226ENST00000641756 C1orf159Q96HA4 380 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 TUBA4BQ9H853 241 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 PATZ1Q9HBE1 687 aaKnown RBP14.52□□□□□ -0.09
PHGDH-226ENST00000641756 CHD8Q9HCK8 2581 aa14.52□□□□□ -0.09
PHGDH-226ENST00000641756 OR9G1Q8NH87 305 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 ZNF596Q8TC21 504 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 TMEM186Q96B77 213 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 FLYWCH2Q96CP2 140 aaKnown RBP14.51□□□□□ -0.09
PHGDH-226ENST00000641756 P2RX4Q99571 388 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 GGTLC1Q9BX51 225 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 RALYQ9UKM9 306 aaKnown RBP14.51□□□□□ -0.09
PHGDH-226ENST00000641756 ZNF257Q9Y2Q1 563 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 ABCA4P78363 2273 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 MPDU1O75352 247 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 YIF1AO95070 293 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 CD81P60033 236 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 TMEM177Q53S58 311 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 C2CD4CQ8TF44 421 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 SSMEM1Q8WWF3 244 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 ST6GALNAC6Q969X2 333 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 TMEM204Q9BSN7 226 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 PXMP4Q9Y6I8 212 aa14.51□□□□□ -0.09
PHGDH-226ENST00000641756 OR2C1O95371 312 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 IGHV2-70P01814 119 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 ZNF841Q6ZN19 808 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 C8orf31Q8N9H6 132 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 OR10W1Q8NGF6 305 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 FAM122AQ96E09 287 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 NPVFQ9HCQ7 196 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 TPRP12270 2363 aaKnown RBP14.5□□□□□ -0.09
PHGDH-226ENST00000641756 NCOR2Q9Y618 2525 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 A0A087X0M5 115 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 A0A1B0GX30 115 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 hCG_1809904A0A1W2PP81 198 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 A0A1W2PR64 198 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 A0A1W2PRV1 198 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 OPRK1P41145 380 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 PSMB3P49720 205 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 MEF2BQ02080 365 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-226ENST00000641756 PMS2P11Q13670 270 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 SLC35E3Q7Z769 313 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 TMEM133Q9H2Q1 129 aa14.5□□□□□ -0.09
PHGDH-226ENST00000641756 SAV1Q9H4B6 383 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-226ENST00000641756 TRBV23-1A0A0A0MS06 115 aa14.49□□□□□ -0.09
PHGDH-226ENST00000641756 MT-ND4LP03901 98 aa14.49□□□□□ -0.09
PHGDH-226ENST00000641756 CTRB1P17538 263 aa14.49□□□□□ -0.09
PHGDH-226ENST00000641756 PPOXP50336 477 aa14.49□□□□□ -0.09
PHGDH-226ENST00000641756 CTRB2Q6GPI1 263 aa14.49□□□□□ -0.09
PHGDH-226ENST00000641756 TGIF2LXQ8IUE1 241 aa14.49□□□□□ -0.09
PHGDH-226ENST00000641756 LSM4Q9Y4Z0 139 aaKnown RBP14.49□□□□□ -0.09
PHGDH-226ENST00000641756 LRBAP50851 2863 aa14.49□□□□□ -0.09
PHGDH-226ENST00000641756 IGHV3-72A0A0B4J1Y9 119 aa14.48□□□□□ -0.09
PHGDH-226ENST00000641756 FAM71F2Q6NXP2 309 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms