RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 PLA2G5P39877 138 aa11.79□□□□□ -0.52
CHD1L-211ENST00000639534 GPR6P46095 362 aaPredicted RBP11.79□□□□□ -0.52
CHD1L-211ENST00000639534 RPS16P62249 146 aaKnown RBP11.79□□□□□ -0.52
CHD1L-211ENST00000639534 RPL8P62917 257 aaKnown RBP11.79□□□□□ -0.52
CHD1L-211ENST00000639534 RAB31Q13636 194 aa11.79□□□□□ -0.52
CHD1L-211ENST00000639534 GUCA2BQ16661 112 aa11.79□□□□□ -0.52
CHD1L-211ENST00000639534 FFAR4Q5NUL3 377 aa11.79□□□□□ -0.52
CHD1L-211ENST00000639534 KIR3DL3Q8N743 410 aa11.79□□□□□ -0.52
CHD1L-211ENST00000639534 OR10G4Q8NGN3 311 aa11.79□□□□□ -0.52
CHD1L-211ENST00000639534 RCC1LQ96I51 464 aaKnown RBP11.79□□□□□ -0.52
CHD1L-211ENST00000639534 SSBP3Q9BWW4 388 aaPredicted RBP11.79□□□□□ -0.52
CHD1L-211ENST00000639534 NPVFQ9HCQ7 196 aa11.79□□□□□ -0.52
CHD1L-211ENST00000639534 SLC39A9Q9NUM3 307 aa11.79□□□□□ -0.52
CHD1L-211ENST00000639534 MAP1BP46821 2468 aaKnown RBP11.78□□□□□ -0.52
CHD1L-211ENST00000639534 MAP1LC3B2A6NCE7 125 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 SRRM4A7MD48 611 aaKnown RBP11.78□□□□□ -0.52
CHD1L-211ENST00000639534 RRHO14718 337 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 OPRK1P41145 380 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 EFNA4P52798 201 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 ELLP55199 621 aaPredicted RBP11.78□□□□□ -0.52
CHD1L-211ENST00000639534 ERHP84090 104 aaKnown RBP11.78□□□□□ -0.52
CHD1L-211ENST00000639534 C2orf83Q53S99 150 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 ATRAIDQ6UW56 229 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 RBMS3Q6XE24 437 aaKnown RBP11.78□□□□□ -0.52
CHD1L-211ENST00000639534 C1orf122Q6ZSJ8 110 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 TEX45Q8NA69 505 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 OR10G9Q8NGN4 311 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 OR10G7Q8NGN6 311 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 CLDND2Q8NHS1 167 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 RNF5Q99942 180 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 HINT2Q9BX68 163 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 MAP1LC3BQ9GZQ8 125 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 UBTD1Q9HAC8 227 aa11.78□□□□□ -0.52
CHD1L-211ENST00000639534 LOC105371242A0A075B767 164 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 LOC102723971A0A1B0GUV8 181 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 A0A1B0GV50 99 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 C9JQL5 133 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 BUB1B-PAK6H3BSN5 160 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 DNASE2O00115 360 aaPredicted RBP11.77□□□□□ -0.53
CHD1L-211ENST00000639534 CA2P00918 260 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 MAS1LP35410 378 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 CEACAM3P40198 252 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 REG1BP48304 166 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 CCL20P78556 96 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 SOHLH1Q5JUK2 328 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 CLRN3Q8NCR9 226 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 P2RX4Q99571 388 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 ONECUT1Q9UBC0 465 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 INSIG2Q9Y5U4 225 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 ARFGEF3Q5TH69 2177 aa11.77□□□□□ -0.53
CHD1L-211ENST00000639534 ARID1AO14497 2285 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 SMCO3A2RU48 225 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 TSPAN9O75954 239 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 SUB1P53999 127 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHD1L-211ENST00000639534 ICAM4Q14773 271 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 ZNF726P1Q15940 193 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 TMEM249Q2WGJ8 235 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 BSXQ3C1V8 233 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 ACSM6Q6P461 480 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 TEPPQ6URK8 271 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 LCN15Q6UWW0 184 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 TREML4Q6UXN2 200 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.76□□□□□ -0.53
CHD1L-211ENST00000639534 OR11H6Q8NGC7 330 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 RPEQ96AT9 228 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 VSIRQ9H7M9 311 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 NDUFA4L2Q9NRX3 87 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 TMA7Q9Y2S6 64 aaKnown RBP11.76□□□□□ -0.53
CHD1L-211ENST00000639534 SPTBN4Q9H254 2564 aa11.76□□□□□ -0.53
CHD1L-211ENST00000639534 IGHV1-3A0A0C4DH29 117 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 SEC14L6B5MCN3 397 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 IGLV2-23P01705 113 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 SRP19P09132 144 aaKnown RBP11.75□□□□□ -0.53
CHD1L-211ENST00000639534 BCL2P10415 239 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 HAGHQ16775 308 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 MMD2Q8IY49 270 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 RPP25LQ8N5L8 163 aaKnown RBP11.75□□□□□ -0.53
CHD1L-211ENST00000639534 TMEM170AQ8WVE7 144 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 MANBALQ9NQG1 85 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 GNG13Q9P2W3 67 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 VAX2Q9UIW0 290 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 BSNQ9UPA5 3926 aa11.75□□□□□ -0.53
CHD1L-211ENST00000639534 C22orf46C9J442 243 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 ENSAO43768 121 aaKnown RBP11.74□□□□□ -0.53
CHD1L-211ENST00000639534 PRTN3P24158 256 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 GPX4P36969 197 aaPredicted RBP11.74□□□□□ -0.53
CHD1L-211ENST00000639534 NPBWR1P48145 328 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 CDC34P49427 236 aaPredicted RBP11.74□□□□□ -0.53
CHD1L-211ENST00000639534 DIAPH2-AS1Q14236 149 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 RHEBQ15382 184 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 MOB3BQ86TA1 216 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 PNKDQ8N490 385 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 OR4P4Q8NGL7 312 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 RNASEH2CQ8TDP1 164 aaKnown RBP11.74□□□□□ -0.53
CHD1L-211ENST00000639534 CACNG8Q8WXS5 425 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 RARRES2Q99969 163 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 LSM4Q9Y4Z0 139 aaKnown RBP11.74□□□□□ -0.53
CHD1L-211ENST00000639534 USF3Q68DE3 2245 aa11.74□□□□□ -0.53
CHD1L-211ENST00000639534 A0A1W2PPR1 153 aa11.73□□□□□ -0.53
CHD1L-211ENST00000639534 OOSP1A8MZH6 123 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms