RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 PLPPR2Q96GM1 343 aa16.99■□□□□ 0.31
PMS1-222ENST00000639501 RNASE7Q9H1E1 156 aaKnown RBP16.99■□□□□ 0.31
PMS1-222ENST00000639501 GP6Q9HCN6 339 aa16.99■□□□□ 0.31
PMS1-222ENST00000639501 PSG11Q9UQ72 335 aa16.99■□□□□ 0.31
PMS1-222ENST00000639501 CACNA1HO95180 2353 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 ZNF253O75346 499 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 HTD2P86397 168 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 PPP1R32Q7Z5V6 425 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 Q8IYB0 196 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 ABHD12Q8N2K0 398 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 C11orf52Q96A22 123 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 HES7Q9BYE0 225 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 POLDIP2Q9Y2S7 368 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 C20orf202A1L168 122 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 PATE3B3GLJ2 98 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 EFNB3Q15768 340 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 IFI44Q8TCB0 444 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 NINJ1Q92982 152 aa16.98■□□□□ 0.31
PMS1-222ENST00000639501 C9JCJ5 164 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 MPDU1O75352 247 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 CELA3BP08861 270 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 SP9P0CG40 484 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 DCAF12Q5T6F0 453 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 UNQ5815/PRO19632Q6UWF5 114 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 ZNF826PQ6ZT77 177 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 MDP1Q86V88 176 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 TUBG2Q9NRH3 451 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 TRAV3A0A0B4J244 114 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 A8MXE2 369 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 CGAP01215 116 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 SRIP30626 198 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 GABRA2P47869 451 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 CENPWQ5EE01 88 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 FAM234AQ9H0X4 552 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 C12orf49Q9H741 205 aa16.97■□□□□ 0.31
PMS1-222ENST00000639501 TRGV10A0A0A0MS01 117 aa16.96■□□□□ 0.31
PMS1-222ENST00000639501 PROP1O75360 226 aa16.96■□□□□ 0.31
PMS1-222ENST00000639501 ZNF324O75467 553 aaPredicted RBP16.96■□□□□ 0.31
PMS1-222ENST00000639501 PTTG1IPP53801 180 aa16.96■□□□□ 0.31
PMS1-222ENST00000639501 FOXF2Q12947 444 aa16.96■□□□□ 0.31
PMS1-222ENST00000639501 LTC4SQ16873 150 aa16.96■□□□□ 0.31
PMS1-222ENST00000639501 ASPHD1Q5U4P2 390 aa16.96■□□□□ 0.31
PMS1-222ENST00000639501 HEYLQ9NQ87 328 aaPredicted RBP16.96■□□□□ 0.31
PMS1-222ENST00000639501 TRBV9A0A0B4J1U6 114 aa16.96■□□□□ 0.3
PMS1-222ENST00000639501 OOEPA6NGQ2 149 aa16.96■□□□□ 0.3
PMS1-222ENST00000639501 BMPR1BO00238 502 aa16.96■□□□□ 0.3
PMS1-222ENST00000639501 VDAC2P45880 294 aaPredicted RBP16.96■□□□□ 0.3
PMS1-222ENST00000639501 HINT1P49773 126 aaPredicted RBP16.96■□□□□ 0.3
PMS1-222ENST00000639501 CX3CL1P78423 397 aa16.96■□□□□ 0.3
PMS1-222ENST00000639501 OR1C1Q15619 314 aa16.96■□□□□ 0.3
PMS1-222ENST00000639501 ZNF766Q5HY98 468 aa16.96■□□□□ 0.3
PMS1-222ENST00000639501 LCN12Q6JVE5 192 aa16.96■□□□□ 0.3
PMS1-222ENST00000639501 DCTN5Q9BTE1 182 aa16.96■□□□□ 0.3
PMS1-222ENST00000639501 METRNQ9UJH8 293 aa16.96■□□□□ 0.3
PMS1-222ENST00000639501 SAA2-SAA4A0A096LPE2 208 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 GFRA3O60609 400 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 FCGR3BO75015 233 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 CYB561P49447 251 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 MRPL54Q6P161 138 aaKnown RBP16.95■□□□□ 0.3
PMS1-222ENST00000639501 STPG3Q8N7X2 389 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 OR13A1Q8NGR1 328 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 LSM4Q9Y4Z0 139 aaKnown RBP16.95■□□□□ 0.3
PMS1-222ENST00000639501 FAM166BA8MTA8 275 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 OR10J3Q5JRS4 329 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 PRAMEF5Q5TYX0 476 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 PRAMEF6Q5VXH4 476 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 PQLC2Q6ZP29 291 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 OR4P4Q8NGL7 312 aa16.95■□□□□ 0.3
PMS1-222ENST00000639501 AHRRA9YTQ3 701 aa16.94■□□□□ 0.3
PMS1-222ENST00000639501 PEAR1Q5VY43 1037 aaPredicted RBP16.94■□□□□ 0.3
PMS1-222ENST00000639501 ORAOV1Q8WV07 137 aa16.94■□□□□ 0.3
PMS1-222ENST00000639501 DPRXA6NFQ7 191 aa16.94■□□□□ 0.3
PMS1-222ENST00000639501 CRYBB3P26998 211 aa16.94■□□□□ 0.3
PMS1-222ENST00000639501 CA2P00918 260 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 PRRX1P54821 245 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 TSKUQ8WUA8 353 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 HSD17B10Q99714 261 aaKnown RBP16.93■□□□□ 0.3
PMS1-222ENST00000639501 LOXL2Q9Y4K0 774 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 LY96Q9Y6Y9 160 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 MMP23AO75900 390 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 ACTL6BO94805 426 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 NTF3P20783 257 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 GNG4P50150 75 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 AARDQ4LEZ3 155 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 LEMD1Q68G75 181 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 SLC35E4Q6ICL7 350 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 MIR17HGQ75NE6 70 aa16.93■□□□□ 0.3
PMS1-222ENST00000639501 NKX6-3A6NJ46 265 aa16.92■□□□□ 0.3
PMS1-222ENST00000639501 TSPOP30536 169 aa16.92■□□□□ 0.3
PMS1-222ENST00000639501 MAGEA5P43359 124 aa16.92■□□□□ 0.3
PMS1-222ENST00000639501 TMPRSS3P57727 454 aa16.92■□□□□ 0.3
PMS1-222ENST00000639501 HES4Q9HCC6 221 aa16.92■□□□□ 0.3
PMS1-222ENST00000639501 CDC42EP3Q9UKI2 254 aa16.92■□□□□ 0.3
PMS1-222ENST00000639501 SMPD2O60906 423 aa16.92■□□□□ 0.3
PMS1-222ENST00000639501 DUTP33316 252 aaKnown RBP16.92■□□□□ 0.3
PMS1-222ENST00000639501 TCTEX1D1Q8N7M0 179 aa16.92■□□□□ 0.3
PMS1-222ENST00000639501 OR4A16Q8NH70 328 aa16.92■□□□□ 0.3
PMS1-222ENST00000639501 LOC105371242A0A075B767 164 aa16.91■□□□□ 0.3
PMS1-222ENST00000639501 CA1P00915 261 aaPredicted RBP16.91■□□□□ 0.3
PMS1-222ENST00000639501 MT-ND6P03923 174 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms