RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ZNF525Q8N782 197 aa15.65■□□□□ 0.1
SCARB2-213ENST00000638680 IFI27L2Q9H2X8 130 aa15.65■□□□□ 0.1
SCARB2-213ENST00000638680 RNASE1P07998 156 aaKnown RBP15.65■□□□□ 0.1
SCARB2-213ENST00000638680 C18orf12Q96KH6 178 aa15.65■□□□□ 0.1
SCARB2-213ENST00000638680 IGHV3OR16-12A0A075B7B8 117 aa15.65■□□□□ 0.1
SCARB2-213ENST00000638680 FAM74A4Q5TZK3 123 aa15.65■□□□□ 0.1
SCARB2-213ENST00000638680 PRELID3AQ96N28 172 aa15.65■□□□□ 0.1
SCARB2-213ENST00000638680 RPL23P62829 140 aaKnown RBP15.65■□□□□ 0.1
SCARB2-213ENST00000638680 ACP7Q6ZNF0 438 aa15.65■□□□□ 0.1
SCARB2-213ENST00000638680 CTSSP25774 331 aa15.65■□□□□ 0.1
SCARB2-213ENST00000638680 GCSAMLQ5JQS6 135 aa15.65■□□□□ 0.1
SCARB2-213ENST00000638680 PEX7O00628 323 aa15.64■□□□□ 0.09
SCARB2-213ENST00000638680 CHRNA10Q9GZZ6 450 aa15.64■□□□□ 0.09
SCARB2-213ENST00000638680 IGHV3-35A0A0C4DH35 117 aa15.64■□□□□ 0.09
SCARB2-213ENST00000638680 RFPL3SP0C7P2 107 aa15.64■□□□□ 0.09
SCARB2-213ENST00000638680 ATP5IP56385 69 aaPredicted RBP15.64■□□□□ 0.09
SCARB2-213ENST00000638680 TMEM30BQ3MIR4 351 aa15.64■□□□□ 0.09
SCARB2-213ENST00000638680 ATP5G2Q06055 141 aa15.64■□□□□ 0.09
SCARB2-213ENST00000638680 CHCHD2Q9Y6H1 151 aaPredicted RBP15.64■□□□□ 0.09
SCARB2-213ENST00000638680 NBEAP1P0C6P0 100 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 TCF23Q7RTU1 214 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 CLEC7AQ9BXN2 247 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 OR11H12B2RN74 326 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 NPIPB11E5RHQ5 1161 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 IFNL4K9M1U5 179 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 ZNF56Q15929 161 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 MIR17HGQ75NE6 70 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 OR11H1Q8NG94 326 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 OR11H2Q8NH07 326 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 LINC00470Q9BZP3 86 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 ATP1A1-AS1Q5TC04 95 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 SAPCD1Q5SSQ6 148 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 NIT1Q86X76 327 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 PNKDQ8N490 385 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 NEUROG3Q9Y4Z2 214 aa15.63■□□□□ 0.09
SCARB2-213ENST00000638680 PIKFYVEQ9Y2I7 2098 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 MUC21A0A0G2JKD1 596 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 MUC21A0A140T8X8 626 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 CIRBPQ14011 172 aaKnown RBP15.62■□□□□ 0.09
SCARB2-213ENST00000638680 MUC21Q5SSG8 566 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 MRPL16Q9NX20 251 aaKnown RBP15.62■□□□□ 0.09
SCARB2-213ENST00000638680 SERF1AO75920 110 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 KIR2DL4Q99706 377 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 F8VVB4 439 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 F8VWA3 439 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 RRN3P1Q2M238 152 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 ZNF418Q8TF45 676 aaPredicted RBP15.62■□□□□ 0.09
SCARB2-213ENST00000638680 SLC25A28Q96A46 364 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 ADMP35318 185 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 OR13A1Q8NGR1 328 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 DDB2Q92466 427 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 COL11A2P13942 1736 aaPredicted RBP15.62■□□□□ 0.09
SCARB2-213ENST00000638680 TMEM170AQ8WVE7 144 aa15.62■□□□□ 0.09
SCARB2-213ENST00000638680 RPP21Q9H633 154 aaKnown RBP15.62■□□□□ 0.09
SCARB2-213ENST00000638680 OTOFQ9HC10 1997 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 IGHV3-23P01764 117 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 LRTM2Q8N967 370 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 H0YIZ8 118 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 NPPCP23582 126 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 MEIG1Q5JSS6 88 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 DNM1P46Q6ZS02 220 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 TIMP4Q99727 224 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 IZUMO1RA6ND01 250 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 LINC00469Q8N7U9 141 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 MAP1BP46821 2468 aaKnown RBP15.61■□□□□ 0.09
SCARB2-213ENST00000638680 J3QW42 95 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 PILRBQ9UKJ0 227 aa15.61■□□□□ 0.09
SCARB2-213ENST00000638680 TRAV9-1A0A075B6T8 112 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 WDR82Q6UXN9 313 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 RBBP6Q7Z6E9 1792 aaKnown RBP15.6■□□□□ 0.09
SCARB2-213ENST00000638680 IGHV3OR16-13A0A075B7E8 117 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 IGHV3-74A0A0B4J1X5 117 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 ZNF324BQ6AW86 544 aaPredicted RBP15.6■□□□□ 0.09
SCARB2-213ENST00000638680 TEX45Q8NA69 505 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 TRAV24A0A0B4J272 114 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 FGF16O43320 207 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 S4R3C0 116 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 C1QTNF9BB2RNN3 333 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 GATA2P23769 480 aaPredicted RBP15.6■□□□□ 0.09
SCARB2-213ENST00000638680 FMC1Q96HJ9 113 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 CELA3AP09093 270 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 TNFSF10P50591 281 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 NRN1Q9NPD7 142 aa15.6■□□□□ 0.09
SCARB2-213ENST00000638680 PRR32B1ATL7 298 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 J3QRE1 110 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 UBE2CO00762 179 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 RAB9AP51151 201 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 EEF1AKMT3Q96AZ1 226 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 ZNF837Q96EG3 531 aaPredicted RBP15.59■□□□□ 0.09
SCARB2-213ENST00000638680 C1QTNF5Q9BXJ0 243 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 IGHV1-69-2A0A0G2JMI3 117 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 TMEM170BQ5T4T1 132 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 LOC105371242A0A075B767 164 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 A0A1B0GUT8 65 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 C1QTNF9P0C862 333 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 FAM106AQ4KMX7 169 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 TTC9CQ8N5M4 171 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 FOXC2Q99958 501 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 DCTN5Q9BTE1 182 aa15.59■□□□□ 0.09
SCARB2-213ENST00000638680 NDUFAF3Q9BU61 184 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms