RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 TAF15Q92804 592 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 PCGF1Q9BSM1 259 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 TMEM147Q9BVK8 224 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 UQCC1Q9NVA1 299 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 TEX50A0A1B0GTY4 177 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 RAB5CP51148 216 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 LYPD6BQ8NI32 183 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 NRGNQ92686 78 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 UBR5O95071 2799 aaPredicted RBP17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 E7EUB6 86 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 SLC25A17O43808 307 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 EIF3GO75821 320 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 TSPAN15O95858 294 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 ELLP55199 621 aaPredicted RBP17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 AKR1C8PQ5T2L2 129 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 HCP5Q6MZN7 132 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 CCDC28AQ8IWP9 274 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 OR10W1Q8NGF6 305 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 CLDND2Q8NHS1 167 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 RPEQ96AT9 228 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 PINX1Q96BK5 328 aaKnown RBP17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 INSIG2Q9Y5U4 225 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 RAB13P51153 203 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 ETV3LQ6ZN32 361 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 LHFPL4Q7Z7J7 247 aa17.48■□□□□ 0.39
CHRNA7-228ENST00000637519 KRBOX1C9JBD0 128 aa17.47■□□□□ 0.39
CHRNA7-228ENST00000637519 FGF7P21781 194 aa17.47■□□□□ 0.39
CHRNA7-228ENST00000637519 SLC24A4Q8NFF2 622 aa17.47■□□□□ 0.39
CHRNA7-228ENST00000637519 PLEKHA3Q9HB20 300 aa17.47■□□□□ 0.39
CHRNA7-228ENST00000637519 TREM1Q9NP99 234 aa17.47■□□□□ 0.39
CHRNA7-228ENST00000637519 ENY2Q9NPA8 101 aa17.47■□□□□ 0.39
CHRNA7-228ENST00000637519 KLF2Q9Y5W3 355 aaPredicted RBP17.47■□□□□ 0.39
CHRNA7-228ENST00000637519 UMAD1C9J7I0 102 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 TRIM77I1YAP6 450 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 M0R1W7 72 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 ADCYAP1P18509 176 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 CCL20P78556 96 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 PRCDQ00LT1 54 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 VMO1Q7Z5L0 202 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 LPAR2Q9HBW0 351 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 SMCO3A2RU48 225 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 C9JQL5 133 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 PRSS46E5RG02 174 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 LY6LH3BQJ8 138 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 CA2P00918 260 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 IFNA4P05014 189 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 RPL8P62917 257 aaKnown RBP17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 SPOCK3Q9BQ16 436 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 ZNF430Q9H8G1 570 aaPredicted RBP17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 HILPDAQ9Y5L2 63 aa17.46■□□□□ 0.39
CHRNA7-228ENST00000637519 NPY1RP25929 384 aa17.45■□□□□ 0.38
CHRNA7-228ENST00000637519 MC5RP33032 325 aa17.45■□□□□ 0.38
CHRNA7-228ENST00000637519 LMO4P61968 165 aa17.45■□□□□ 0.38
CHRNA7-228ENST00000637519 UQCC3Q6UW78 93 aa17.45■□□□□ 0.38
CHRNA7-228ENST00000637519 AIFM2Q9BRQ8 373 aa17.45■□□□□ 0.38
CHRNA7-228ENST00000637519 RPRMQ9NS64 109 aa17.45■□□□□ 0.38
CHRNA7-228ENST00000637519 ZNF257Q9Y2Q1 563 aa17.45■□□□□ 0.38
CHRNA7-228ENST00000637519 FAM208BQ5VWN6 2430 aa17.45■□□□□ 0.38
CHRNA7-228ENST00000637519 A0A1W2PPI3 338 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 PRTN3P24158 256 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 SNCAP37840 140 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 ATP6V1FQ16864 119 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 VWC2Q2TAL6 325 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 SSX7Q7RTT5 188 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 OR11H6Q8NGC7 330 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 AMMECR1Q9Y4X0 333 aaPredicted RBP17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 LRRK2Q5S007 2527 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 APOC3P02656 99 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 RPP30P78346 268 aaKnown RBP17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 MRGPRG-AS1Q2M3A8 158 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 SPSB3Q6PJ21 355 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 TMEM167AQ8TBQ9 72 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 PSMG3Q9BT73 122 aaPredicted RBP17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 PARD6GQ9BYG4 376 aaPredicted RBP17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 COMMD5Q9GZQ3 224 aa17.44■□□□□ 0.38
CHRNA7-228ENST00000637519 CSMD1Q96PZ7 3565 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 TMEM218A2RU14 115 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 CGB1A6NKQ9 187 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 TIMM23O14925 209 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 USF1P22415 310 aaPredicted RBP17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 CD24P25063 80 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 PAX2Q02962 417 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 TPTE2P1Q5T6R2 138 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 ACSM6Q6P461 480 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 NPCDR1Q9BY65 106 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 SPG11Q96JI7 2443 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 A0A1B0GW64 132 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 NUDT19A8MXV4 375 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 RNASEK-C17orf49H0YIS7 233 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 IGKV1D-33P01593 117 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 IGKV1-33P01594 117 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 H2AFB1P0C5Y9 115 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 HTR1DP28221 377 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 CD1BP29016 333 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 PDLIM4P50479 330 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 RAB2AP61019 212 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 ZNF726P1Q15940 193 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 FBLN7Q53RD9 439 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 OR5B3Q8NH48 314 aa17.43■□□□□ 0.38
CHRNA7-228ENST00000637519 SFT2D1Q8WV19 159 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms