RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 GDF1P27539 372 aa12.96□□□□□ -0.33
CACNA1A-235ENST00000637004 CX3CL1P78423 397 aa12.96□□□□□ -0.33
CACNA1A-235ENST00000637004 IL11RAQ14626 422 aa12.96□□□□□ -0.33
CACNA1A-235ENST00000637004 C19orf35Q6ZS72 473 aa12.96□□□□□ -0.33
CACNA1A-235ENST00000637004 ZNF738Q8NE65 137 aa12.96□□□□□ -0.33
CACNA1A-235ENST00000637004 DUSP23Q9BVJ7 150 aa12.96□□□□□ -0.33
CACNA1A-235ENST00000637004 GGTLC1Q9BX51 225 aa12.96□□□□□ -0.33
CACNA1A-235ENST00000637004 GSX1Q9H4S2 264 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-235ENST00000637004 BET1LQ9NYM9 111 aa12.96□□□□□ -0.33
CACNA1A-235ENST00000637004 MRPS16Q9Y3D3 137 aaKnown RBP12.96□□□□□ -0.33
CACNA1A-235ENST00000637004 WISP2O76076 250 aa12.96□□□□□ -0.34
CACNA1A-235ENST00000637004 MIC13Q5XKP0 118 aa12.96□□□□□ -0.34
CACNA1A-235ENST00000637004 OR2D3Q8NGH3 330 aa12.96□□□□□ -0.34
CACNA1A-235ENST00000637004 MGST2Q99735 147 aa12.96□□□□□ -0.34
CACNA1A-235ENST00000637004 SLC35D1Q9NTN3 355 aa12.96□□□□□ -0.34
CACNA1A-235ENST00000637004 C12orf77C9JDV5 145 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 K7EP13 123 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 TOMM40O96008 361 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 OR10J4P0C629 311 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 TMPRSS3P57727 454 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 RHOBP62745 196 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 OR52L2PQ8NGH6 319 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 HSD17B10Q99714 261 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 OOEPA6NGQ2 149 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 FRMD6-AS1P0C7T7 363 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 C3orf79P0CE67 100 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 ZNF83P51522 516 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 TMPRSS7Q7RTY8 843 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 SCCPDHQ8NBX0 429 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 OR2Y1Q8NGV0 311 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 BORCS7Q96B45 105 aa12.95□□□□□ -0.34
CACNA1A-235ENST00000637004 GFRA1P56159 465 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 PMCHL1Q16048 86 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 TMEM136Q6ZRR5 245 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 OR5B3Q8NH48 314 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 DEPPQ9NTK1 212 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 COX11Q9Y6N1 276 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 NCOR2Q9Y618 2525 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 CFAP47Q6ZTR5 3102 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 AQP7O14520 342 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 HLA-DQA1P01909 254 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 AREGP15514 252 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 GNG4P50150 75 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 FOXG1P55316 489 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 CLDN18P56856 261 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 MS4A5Q9H3V2 200 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 HBZP02008 142 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 CD46P15529 392 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 TSPOP30536 169 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 MORN2Q502X0 79 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 VHLLQ6RSH7 139 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 TUSC5Q8IXB3 177 aa12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 HEYLQ9NQ87 328 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-235ENST00000637004 FAM90A9PA6NNJ1 464 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 RCHY1Q96PM5 261 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 CDC42EP3Q9UKI2 254 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 A6NJY4 79 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 HAND1O96004 215 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 NBL1P41271 181 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 OR1C1Q15619 314 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 KIAA1644Q3SXP7 199 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 STUMQ69YW2 141 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 SLC35E4Q6ICL7 350 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 OSTCQ9NRP0 149 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 ARL2-SNX15V9GYD0 113 aa12.93□□□□□ -0.34
CACNA1A-235ENST00000637004 PCNX2A6NKB5 2137 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 HELTA6NFD8 242 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 AMY1AP04745 511 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 SRIP30626 198 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 EFNB3Q15768 340 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 C1orf185Q5T7R7 199 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 WDR86Q86TI4 376 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 NIT1Q86X76 327 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 GCNT2Q8N0V5 402 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 OR4A16Q8NH70 328 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 WNT10AQ9GZT5 417 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 NPVFQ9HCQ7 196 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 DIDO1Q9BTC0 2240 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 LINC00473A8K010 186 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 OR9G9P0C7N8 305 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 CEACAM8P31997 349 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 HINT1P49773 126 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 SRYQ05066 204 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 RAB31Q13636 194 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 CENPWQ5EE01 88 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 CFAP161Q6P656 301 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 PNKDQ8N490 385 aa12.92□□□□□ -0.34
CACNA1A-235ENST00000637004 LY6G6EA0A0G2JKS1 128 aa12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 PSPNO60542 156 aa12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 SPINK4O60575 86 aa12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 FOLR3P41439 243 aa12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 TIGITQ495A1 244 aa12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 OR52E5Q8NH55 327 aa12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 SSMEM1Q8WWF3 244 aa12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 ALKBH7Q9BT30 221 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 RPH3ALQ9UNE2 315 aa12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 LSM4Q9Y4Z0 139 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 U3KQA8 63 aa12.91□□□□□ -0.34
CACNA1A-235ENST00000637004 USF3Q68DE3 2245 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms