RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 IL6RP08887 468 aaPredicted RBP12□□□□□ -0.49
CLN6-215ENST00000636674 OR4A8P0C604 315 aa12□□□□□ -0.49
CLN6-215ENST00000636674 RNF224P0DH78 156 aa12□□□□□ -0.49
CLN6-215ENST00000636674 ESDP10768 282 aa12□□□□□ -0.49
CLN6-215ENST00000636674 NDUFB7P17568 137 aa12□□□□□ -0.49
CLN6-215ENST00000636674 BMP5P22003 454 aa12□□□□□ -0.49
CLN6-215ENST00000636674 GCHFRP30047 84 aa12□□□□□ -0.49
CLN6-215ENST00000636674 TMPRSS7Q7RTY8 843 aa12□□□□□ -0.49
CLN6-215ENST00000636674 CNEP1R1Q8N9A8 125 aa12□□□□□ -0.49
CLN6-215ENST00000636674 ZNF436-AS1Q8NC38 126 aaPredicted RBP12□□□□□ -0.49
CLN6-215ENST00000636674 OPN3Q9H1Y3 402 aaPredicted RBP12□□□□□ -0.49
CLN6-215ENST00000636674 AURKAIP1Q9NWT8 199 aaPredicted RBP12□□□□□ -0.49
CLN6-215ENST00000636674 FZR1Q9UM11 496 aa12□□□□□ -0.49
CLN6-215ENST00000636674 FOXA2Q9Y261 457 aaPredicted RBP12□□□□□ -0.49
CLN6-215ENST00000636674 YTHDF2Q9Y5A9 579 aaKnown RBP12□□□□□ -0.49
CLN6-215ENST00000636674 IGHV1-18A0A0C4DH31 117 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 MT-CO2P00403 227 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 AREGP15514 252 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 RPL29P47914 159 aaKnown RBP11.99□□□□□ -0.49
CLN6-215ENST00000636674 RAB7AP51149 207 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 RHOBP62745 196 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 LTC4SQ16873 150 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 RPL39P5Q59GN2 51 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 HES3Q5TGS1 186 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 C9orf106Q8NAJ2 232 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 OCC1Q8TAD7 63 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 SFXN3Q9BWM7 321 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 IL36BQ9NZH7 164 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 DUSP13Q9UII6 198 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 TRAV3A0A0B4J244 114 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 CGB3P0DN86 165 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 CGB7P0DN87 165 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 ADMP35318 185 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 ZNF134P52741 427 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 EFNB3Q15768 340 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 ARSJQ5FYB0 599 aaPredicted RBP11.99□□□□□ -0.49
CLN6-215ENST00000636674 C1orf194Q5T5A4 169 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 VKORC1L1Q8N0U8 176 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 ABHD12Q8N2K0 398 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 RAB9BQ9NP90 201 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 PLSCR4Q9NRQ2 329 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 TMEM14BQ9NUH8 114 aa11.99□□□□□ -0.49
CLN6-215ENST00000636674 TRGV10A0A0A0MS01 117 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 SNRPCP09234 159 aaKnown RBP11.98□□□□□ -0.49
CLN6-215ENST00000636674 FTH1P19P0C7X4 201 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 NPY1RP25929 384 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 POU2AF1Q16633 256 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 DHRS13Q6UX07 377 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 DMRTC2Q8IXT2 367 aaPredicted RBP11.98□□□□□ -0.49
CLN6-215ENST00000636674 TMEM256Q8N2U0 113 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 GCSAMQ8N6F7 178 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 STPG3Q8N7X2 389 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 SLC24A4Q8NFF2 622 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 SDSLQ96GA7 329 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 SLC25A10Q9UBX3 287 aaPredicted RBP11.98□□□□□ -0.49
CLN6-215ENST00000636674 OR10J1P30954 320 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 ERVFC1-1P60608 527 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 HSPE1P61604 102 aaKnown RBP11.98□□□□□ -0.49
CLN6-215ENST00000636674 RPL31P62899 125 aaKnown RBP11.98□□□□□ -0.49
CLN6-215ENST00000636674 PRR20EP86478 221 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 PRR20CP86479 221 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 PRR20DP86480 221 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 PRR20BP86481 221 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 PRR20AP86496 221 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 CALYQ9NYX4 217 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 NAGKQ9UJ70 344 aa11.98□□□□□ -0.49
CLN6-215ENST00000636674 POLR3KQ9Y2Y1 108 aaPredicted RBP11.98□□□□□ -0.49
CLN6-215ENST00000636674 DSCAML1Q8TD84 2053 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 THBS3P49746 956 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 PAFAH1B2P68402 229 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 RAB31Q13636 194 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 OR2Z1Q8NG97 314 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 CMTM2Q8TAZ6 248 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 SSMEM1Q8WWF3 244 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 CORO2AQ92828 525 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 NEUROG1Q92886 237 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 UHRF2Q96PU4 802 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 FAM234AQ9H0X4 552 aa11.97□□□□□ -0.49
CLN6-215ENST00000636674 SEPSECSQ9HD40 501 aaKnown RBP11.97□□□□□ -0.49
CLN6-215ENST00000636674 TRBV9A0A0B4J1U6 114 aa11.96□□□□□ -0.49
CLN6-215ENST00000636674 K7EN84 100 aa11.96□□□□□ -0.49
CLN6-215ENST00000636674 NUTF2P61970 127 aaKnown RBP11.96□□□□□ -0.49
CLN6-215ENST00000636674 IGFL2Q6UWQ7 119 aa11.96□□□□□ -0.49
CLN6-215ENST00000636674 TCF23Q7RTU1 214 aa11.96□□□□□ -0.49
CLN6-215ENST00000636674 SARAFQ96BY9 339 aa11.96□□□□□ -0.49
CLN6-215ENST00000636674 ADTRPQ96IZ2 230 aa11.96□□□□□ -0.49
CLN6-215ENST00000636674 MS4A10Q96PG2 267 aa11.96□□□□□ -0.49
CLN6-215ENST00000636674 TMUB1Q9BVT8 246 aa11.96□□□□□ -0.49
CLN6-215ENST00000636674 ZNF71Q9NQZ8 489 aaPredicted RBP11.96□□□□□ -0.49
CLN6-215ENST00000636674 TP53TG3Q9ULZ0 132 aa11.96□□□□□ -0.49
CLN6-215ENST00000636674 KNTC1P50748 2209 aa11.96□□□□□ -0.49
CLN6-215ENST00000636674 A0A1B0GUS0 222 aa11.96□□□□□ -0.5
CLN6-215ENST00000636674 EREGO14944 169 aa11.96□□□□□ -0.5
CLN6-215ENST00000636674 NUPR1O60356 82 aa11.96□□□□□ -0.5
CLN6-215ENST00000636674 SCGB1D1O95968 90 aa11.96□□□□□ -0.5
CLN6-215ENST00000636674 LHBP01229 141 aa11.96□□□□□ -0.5
CLN6-215ENST00000636674 LGALS4P56470 323 aa11.96□□□□□ -0.5
CLN6-215ENST00000636674 USF2Q15853 346 aaPredicted RBP11.96□□□□□ -0.5
CLN6-215ENST00000636674 SPATA31B1PQ5VZV4 182 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms