RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 Q6ZRM9 215 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 MED13LQ71F56 2210 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 C1QTNF9BB2RNN3 333 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 DVL1O14640 695 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 CNIH1O95406 144 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 TMEM50AO95807 157 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 ADCYAP1P18509 176 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 ADIPOQQ15848 244 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 SLC16A13Q7RTY0 426 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 FAM216BQ8N7L0 139 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 C12orf57Q99622 126 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 SCNM1Q9BWG6 230 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 DNAJC4Q9NNZ3 241 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 C9JCJ5 164 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 GFRA3O60609 400 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 CA7P43166 264 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 CD69Q07108 199 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 KIF26BQ2KJY2 2108 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 MOB3BQ86TA1 216 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 TMEM133Q9H2Q1 129 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 IL6RP08887 468 aaPredicted RBP3.77□□□□□ -1.81
SCN1A-210ENST00000635776 DEFA4P12838 97 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 FOSL1P15407 271 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 HTR1DP28221 377 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 CSN1S1P47710 185 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 CDX1P47902 265 aaPredicted RBP3.77□□□□□ -1.81
SCN1A-210ENST00000635776 RANP62826 216 aaKnown RBP3.77□□□□□ -1.81
SCN1A-210ENST00000635776 UBE2L3P68036 154 aaKnown RBP3.77□□□□□ -1.81
SCN1A-210ENST00000635776 FRZBQ92765 325 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 PARLQ9H300 379 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 LPAR2Q9HBW0 351 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 GOLGB1Q14789 3259 aaKnown RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 PPIAL4CA0A0B4J2A2 164 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 A0A0G2JNJ9 132 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 A0A0G2JRQ6 117 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 KIAA1324LA8MWY0 1029 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 PPIAL4GP0DN37 164 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 HIST1H1BP16401 226 aaKnown RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 ATRAIDQ6UW56 229 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 TREML4Q6UXN2 200 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 SPNS3Q6ZMD2 512 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 MYPOPQ86VE0 399 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 NABP2Q9BQ15 211 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 Q9UFV3 132 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 A0A1W2PPQ1 181 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 VDAC2P45880 294 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 RPEL1Q2QD12 228 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 CA2P00918 260 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 ARG1P05089 322 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 OR5G3P0C626 314 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 P0C879 139 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 OR10J1P30954 320 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 RPL39P5Q59GN2 51 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 OR4F17Q8NGA8 305 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 C2CD4CQ8TF44 421 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 SMIM12Q96EX1 92 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 BSCL2Q96G97 398 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 CRIM1Q9NZV1 1036 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF407Q9C0G0 2248 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 HELTA6NFD8 242 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 AREGP15514 252 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 FGF8P55075 233 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 PSG5Q15238 335 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 SNRNP40Q96DI7 357 aaKnown RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 GCHFRP30047 84 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 STPG3Q8N7X2 389 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 BEND2Q8NDZ0 799 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 OR5AN1Q8NGI8 311 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 RARRES2Q99969 163 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 CBLN4Q9NTU7 201 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 SOX21Q9Y651 276 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 URGCP-MRPS24S4R325 110 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 DPRXA6NFQ7 191 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 FAM90A27PA6NNH2 459 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 LINC00473A8K010 186 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 RAMP3O60896 148 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 EGR1P18146 543 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 C21orf62-AS1Q17RA5 79 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF833PQ6ZTB9 187 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 ZFP82Q8N141 532 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 RPP25LQ8N5L8 163 aaKnown RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 DPM3Q9P2X0 92 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 A0A0U1RQK1 487 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF320A2RRD8 509 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 M0R1W7 72 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 HYPMO75409 117 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 OR9G9P0C7N8 305 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 HIST1H1EP10412 219 aaKnown RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 PAFAH1B2P68402 229 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 DMRTA2Q96SC8 542 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 PRR14LQ5THK1 2151 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 SRSF3P84103 164 aaKnown RBP3.76□□□□□ -1.81
SCN1A-210ENST00000635776 TNXAQ16473 311 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 LINC00469Q8N7U9 141 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 TMEM68Q96MH6 324 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 TMEM14BQ9NUH8 114 aa3.76□□□□□ -1.81
SCN1A-210ENST00000635776 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-210ENST00000635776 SERTM2A0A1B0GWG4 89 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 TMEM8BA6NDV4 472 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 C15orf62A8K5M9 175 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms