RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 CCL3L1P16619 93 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 USF1P22415 310 aaPredicted RBP16.24■□□□□ 0.19
CLN8-208ENST00000635751 LOXL3P58215 753 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 LCN2P80188 198 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 C17orf58Q2M2W7 97 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 RNF212Q495C1 297 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 OR10G4Q8NGN3 311 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 Q96MF0 132 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 CALYQ9NYX4 217 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 PPIAL4CA0A0B4J2A2 164 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 FAM90A9PA6NNJ1 464 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 H3BQ15 152 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 HPRT1P00492 218 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 PPIAL4GP0DN37 164 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 LINC00205P59089 165 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 ZNF726P1Q15940 193 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 CENPVQ7Z7K6 275 aaPredicted RBP16.24■□□□□ 0.19
CLN8-208ENST00000635751 CYB561D1Q8N8Q1 229 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 OR10P1Q8NGE3 313 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 RCC1LQ96I51 464 aaKnown RBP16.24■□□□□ 0.19
CLN8-208ENST00000635751 BIN3Q9NQY0 253 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 GNG13Q9P2W3 67 aa16.24■□□□□ 0.19
CLN8-208ENST00000635751 A0A096LNT2 108 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 KBTBD11-OT1A0A1B0GTJ5 212 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 ZNF729A6NN14 1252 aaPredicted RBP16.23■□□□□ 0.19
CLN8-208ENST00000635751 PMS2P5A8MQ11 134 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 CEBPZOSA8MTT3 80 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 M0R1X1 148 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 ITGB1BP1O14713 200 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 FCGR3BO75015 233 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 PROP1O75360 226 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 ERVFRD-1P60508 538 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 RAB5BP61020 215 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 C8orf46Q8TAG6 207 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 ZDHHC16Q969W1 377 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 ZNF714Q96N38 554 aa16.23■□□□□ 0.19
CLN8-208ENST00000635751 FLNBO75369 2602 aaKnown RBP16.22■□□□□ 0.19
CLN8-208ENST00000635751 RNF223E7ERA6 249 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 RBFOX2O43251 390 aaKnown RBP eCLIP16.22■□□□□ 0.191e-7■■■□□ 14.8
CLN8-208ENST00000635751 LY86O95711 162 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 CEBPGP53567 150 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 LCN15Q6UWW0 184 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 ZNF429Q86V71 674 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 LY6G5BQ8NDX9 201 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 FOXC2Q99958 501 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 IFI27L2Q9H2X8 130 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 A0A1W2PPH5 198 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 FBP1P09467 338 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 BCL2P10415 239 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 KIR2DS2P43631 304 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 RAB7AP51149 207 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 ELLP55199 621 aaPredicted RBP16.22■□□□□ 0.19
CLN8-208ENST00000635751 AARDQ4LEZ3 155 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 ISOC2Q96AB3 205 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 QTRT1Q9BXR0 403 aaKnown RBP16.22■□□□□ 0.19
CLN8-208ENST00000635751 GAL3ST2Q9H3Q3 398 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 LPAR2Q9HBW0 351 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 GAB2Q9UQC2 676 aa16.22■□□□□ 0.19
CLN8-208ENST00000635751 C1orf196B1AJZ1 125 aa16.21■□□□□ 0.19
CLN8-208ENST00000635751 FOXH1O75593 365 aa16.21■□□□□ 0.19
CLN8-208ENST00000635751 MMP23AO75900 390 aa16.21■□□□□ 0.19
CLN8-208ENST00000635751 SSX7Q7RTT5 188 aa16.21■□□□□ 0.19
CLN8-208ENST00000635751 WFDC11Q8NEX6 87 aa16.21■□□□□ 0.19
CLN8-208ENST00000635751 NIPSNAP3BQ9BS92 247 aa16.21■□□□□ 0.19
CLN8-208ENST00000635751 NOTCH2Q04721 2471 aa16.21■□□□□ 0.18
CLN8-208ENST00000635751 A0A1W2PPE2 198 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 MAP1LC3B2A6NCE7 125 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 ZFP92A6NM28 416 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 LIPFP07098 398 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 OR9G9P0C7N8 305 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 ZNF134P52741 427 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 DLX6P56179 175 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 VWC2Q2TAL6 325 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 RPL39P5Q59GN2 51 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 MAPK1IP1LQ8NDC0 245 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 MAP1LC3BQ9GZQ8 125 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 LINC00574Q9H8X3 128 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 ITPR3Q14573 2671 aa16.2■□□□□ 0.18
CLN8-208ENST00000635751 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.19■□□□□ 0.184e-15■■■■□ 21.5
CLN8-208ENST00000635751 IFNA1P01562 189 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 ARG1P05089 322 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 FGF7P21781 194 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 FGF8P55075 233 aaPredicted RBP16.19■□□□□ 0.18
CLN8-208ENST00000635751 ERVK-16P61578 105 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 PRAMEF5Q5TYX0 476 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 ZFP82Q8N141 532 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 C2CD4CQ8TF44 421 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 TVP23CQ96ET8 276 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 S1PR3Q99500 378 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 GFOD1Q9NXC2 390 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 IDI2-AS1Q9NZ38 188 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 ZNF469Q96JG9 3925 aaPredicted RBP16.19■□□□□ 0.18
CLN8-208ENST00000635751 OR2C1O95371 312 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 MBP02144 154 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 RAB5AP20339 215 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 OR2B8PP59922 312 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 PAX2Q02962 417 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 LOXL1Q08397 574 aaPredicted RBP16.19■□□□□ 0.18
CLN8-208ENST00000635751 PMS2P11Q13670 270 aa16.19■□□□□ 0.18
CLN8-208ENST00000635751 HABP2Q14520 560 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms