RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ZFP3Q96NJ6 502 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 GAFA1Q96PS6 74 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SPACA5Q96QH8 159 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR8B2Q96RD0 313 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR52B2Q96RD2 323 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SDF2Q99470 211 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 CCL13Q99616 98 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 NAPGQ99747 312 aaPredicted RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 HSPB9Q9BQS6 159 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 FAM103A1Q9BTL3 118 aaKnown RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ANP32EQ9BTT0 268 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TMEM243Q9BU79 118 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SUCNR1Q9BXA5 334 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 CHST6Q9GZX3 395 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 IQCGQ9H095 443 aaKnown RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 RACGAP1Q9H0H5 632 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PCBD2Q9H0N5 130 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TLNRD1Q9H1K6 362 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SYT4Q9H2B2 425 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR51M1Q9H341 326 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PIGUQ9H490 435 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 WDR55Q9H6Y2 383 aaPredicted RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 CCNB1IP1Q9NPC3 277 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PARP11Q9NR21 331 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 C8orf17Q9NRJ1 99 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 C19orf12Q9NSK7 152 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TMEM106BQ9NUM4 274 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 FAIMQ9NVQ4 179 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TMEM38BQ9NVV0 291 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TAS2R5Q9NYW4 299 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF229Q9UJW7 825 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 VPREB3Q9UKI3 123 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SNX12Q9UMY4 172 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 HILPDAQ9Y5L2 63 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 DNAJC15Q9Y5T4 150 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 INSIG2Q9Y5U4 225 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF780BQ9Y6R6 833 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 U3KQK5 164 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 DSPPQ9NZW4 1301 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PKHD1P08F94 4074 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 HSPG2P98160 4391 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 IGLV3-9A0A075B6K5 115 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 A0A087WUJ7 227 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 IGLV3-32A0A0A0MS00 114 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 A0A0B4J2E0 115 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 A0A1B0GX12 115 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 A0A1W2PNN7 141 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 A0A1W2PQD3 144 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 FAM183AA6NL82 134 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF99A8MXY4 864 aaPredicted RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CENPBD1B2RD01 187 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF736B4DX44 427 aaPredicted RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 SEC14L6B5MCN3 397 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 H0YIV9 168 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TEX46H3BTG2 121 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 M0R1X1 148 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 FXYD1O00168 92 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 NDUFS8O00217 210 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TNFRSF11BO00300 401 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 GABRPO00591 440 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CDC42EP2O14613 210 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 NPFFO15130 113 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ACOX3O15254 700 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ENSAO43768 121 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CCDC22O60826 627 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 UBL3O95164 117 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 OR5F1O95221 314 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 OTCP00480 354 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 IGHV1-69P01742 117 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 MAS1P04201 325 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 IGLV7-43P04211 117 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 SERPINE2P07093 398 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PFN1P07737 140 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 SNRPAP09012 282 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TSPAN19P0C672 248 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 MLNP12872 115 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 IFI30P13284 250 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF35P13682 527 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 SPNP16150 400 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF43P17038 809 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PPIBP23284 216 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 HLA-DMAP28067 261 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 APLNRP35414 380 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 GLRXP35754 106 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CRATP43155 626 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 GABRA2P47869 451 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 POLR2HP52434 150 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CRISP1P54107 249 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 CARD18P57730 90 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 TAS2R43P59537 309 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 DEFB1P60022 68 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 KRTAP12-3P60328 96 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 VSNL1P62760 191 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 BLCAPP62952 87 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 PSG4Q00888 419 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 LIPEQ05469 1076 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC74AQ0VAA2 488 aa0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 DYNC1I2Q13409 638 aaKnown RBP0.53□□□□□ -2.32
SMARCB1-209ENST00000635578 BTN1A1Q13410 526 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms