RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CT45A5P0DMU8 189 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 CT45A7P0DMV0 189 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 SRD5A1P18405 259 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 PVALBP20472 110 aaPredicted RBP11.64□□□□□ -0.55
LINC00339-208ENST00000634934 LPAR6P43657 344 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 ARHGDIBP52566 201 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 S100A10P60903 97 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 DEFB112Q30KQ8 113 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 C9orf139Q6ZV77 190 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 IQCF2Q8IXL9 164 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 LINC00518Q8N0U6 118 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 IL22RA2Q969J5 263 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 TMEM56Q96MV1 263 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 C11orf1Q9H5F2 150 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 SLC2A9Q9NRM0 540 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 TMEM56-RWDD3S4R434 201 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 NAV3Q8IVL0 2385 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 IGHV3-72A0A0B4J1Y9 119 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 A0A1W2PPI3 338 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 TIMM23O14925 209 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 CRLF1O75462 422 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 PGLYRP1O75594 196 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-208ENST00000634934 MBPP02686 304 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-208ENST00000634934 DUTP33316 252 aaKnown RBP11.63□□□□□ -0.55
LINC00339-208ENST00000634934 RNF212Q495C1 297 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 OR4D5Q8NGN0 318 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 OR51H1Q8NH63 302 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 TCTEX1D2Q8WW35 142 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 ZDHHC16Q969W1 377 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 HSD17B10Q99714 261 aaKnown RBP11.63□□□□□ -0.55
LINC00339-208ENST00000634934 SPIN2AQ99865 258 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 SPIN2BQ9BPZ2 258 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 NABP2Q9BQ15 211 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 TREM1Q9NP99 234 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 GSKIPQ9P0R6 139 aa11.63□□□□□ -0.55
LINC00339-208ENST00000634934 LINC00473A8K010 186 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 ST8SIA3O43173 380 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 IFNA4P05014 189 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 THBS3P49746 956 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 RPL30P62888 115 aaKnown RBP11.62□□□□□ -0.55
LINC00339-208ENST00000634934 SCGB2A2Q13296 93 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 EIF4EBP1Q13541 118 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-208ENST00000634934 OR2B11Q5JQS5 317 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 ZNF66Q6ZN08 573 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 TBC1D26Q86UD7 250 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 C15orf54Q8N8G6 183 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 ZNF383Q8NA42 475 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 GLYATL2Q8WU03 294 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 ADTRPQ96IZ2 230 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 MEGF9Q9H1U4 602 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 SMCO4Q9NRQ5 59 aa11.62□□□□□ -0.55
LINC00339-208ENST00000634934 BTBD17A6NE02 478 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 RNF212BA8MTL3 300 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 MPPED1O15442 326 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 NUPL2O15504 423 aaKnown RBP11.61□□□□□ -0.55
LINC00339-208ENST00000634934 KCNAB3O43448 404 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 CD24P25063 80 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 BRS3P32247 399 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 RAB13P51153 203 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 SRSF3P84103 164 aaKnown RBP11.61□□□□□ -0.55
LINC00339-208ENST00000634934 CATR1Q13166 79 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 PEA15Q15121 130 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 RBMXL1Q96E39 390 aaKnown RBP11.61□□□□□ -0.55
LINC00339-208ENST00000634934 SCRT1Q9BWW7 348 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 BIN3Q9NQY0 253 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 C2CD3Q4AC94 2353 aa11.61□□□□□ -0.55
LINC00339-208ENST00000634934 UMAD1C9J7I0 102 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 H0YJW9 148 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 APOA2P02652 100 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 OR5AC1P0C628 307 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 SFTA3P0C7M3 94 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 SLC25A6P12236 298 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 SNCAP37840 140 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 LRRC75BQ2VPJ9 315 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 Q6ZRG5 221 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 CFHR4Q92496 578 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 ZNF48Q96MX3 618 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-208ENST00000634934 SSX3Q99909 188 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 TMEM222Q9H0R3 208 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 HRH4Q9H3N8 390 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 SLC35D1Q9NTN3 355 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 PRR13Q9NZ81 148 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 MLXQ9UH92 298 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 FCGR3BO75015 233 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 F2RP25116 425 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 BAXQ07812 192 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 HES1Q14469 280 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 ZNF266Q14584 549 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 RTL8BQ17RB0 113 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 RBMS3Q6XE24 437 aaKnown RBP11.6□□□□□ -0.55
LINC00339-208ENST00000634934 SIGLECL1Q8N7X8 197 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 OR5AN1Q8NGI8 311 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 LIN7CQ9NUP9 197 aaKnown RBP11.6□□□□□ -0.55
LINC00339-208ENST00000634934 PLA2G2EQ9NZK7 142 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 CACFD1Q9UGQ2 172 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 WASHC3Q9Y3C0 194 aa11.6□□□□□ -0.55
LINC00339-208ENST00000634934 JMJD1CQ15652 2540 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 C3orf85A0A1B0GTC6 90 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 PITX3O75364 302 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 VENTXO95231 258 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms