RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 APRG1Q8IVJ8 170 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 MFSD4AQ8N468 514 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 OR2C3Q8N628 320 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 OR10W1Q8NGF6 305 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 OR4S2Q8NH73 311 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 MGLLQ99685 303 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 CCDC90BQ9GZT6 254 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 ATG5Q9H1Y0 275 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 DUSP21Q9H596 190 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 CCL28Q9NRJ3 127 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 MRPS7Q9Y2R9 242 aaKnown RBP9.49□□□□□ -0.89
LINC00339-206ENST00000634451 PRELID3BQ9Y3B1 194 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 OR2T8A6NH00 312 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 DEFB4AO15263 64 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 RGS10O43665 173 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 DEFA4P12838 97 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 CD36P16671 472 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 RAB6AP20340 208 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 MFAP2P55001 183 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 APOC4P55056 127 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 AQP4P55087 323 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 NRG4Q8WWG1 115 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 TMEM190Q8WZ59 177 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 ZNF436Q9C0F3 470 aaPredicted RBP9.48□□□□□ -0.89
LINC00339-206ENST00000634451 TP53TG1Q9Y2A0 90 aa9.48□□□□□ -0.89
LINC00339-206ENST00000634451 FAT2Q9NYQ8 4349 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 IGHV3-49A0A0A0MS15 119 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 ANKRD65E5RJM6 399 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-206ENST00000634451 DTYMKP23919 212 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 ANKRD55Q3KP44 614 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 PLET1Q6UQ28 207 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 SPAG8Q99932 426 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-206ENST00000634451 C5orf66Q9H5L9 145 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 HRASLSQ9HDD0 168 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 SCN3BQ9NY72 215 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 MRPL27Q9P0M9 148 aaKnown RBP9.47□□□□□ -0.89
LINC00339-206ENST00000634451 KLK5Q9Y337 293 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-206ENST00000634451 DNAH2Q9P225 4427 aa9.47□□□□□ -0.89
LINC00339-206ENST00000634451 TRBV7-1A0A0A6YYK4 115 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 SULT1C2O00338 296 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 TSPAN4O14817 238 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 TGOLN2O43493 480 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 CTSDP07339 412 aaPredicted RBP9.46□□□□□ -0.9
LINC00339-206ENST00000634451 PSMA1P25786 263 aaKnown RBP9.46□□□□□ -0.9
LINC00339-206ENST00000634451 ADMP35318 185 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 MAS1LP35410 378 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 TRAM1Q15629 374 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 HACD4Q5VWC8 232 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 LGALS9CQ6DKI2 356 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 C22orf42Q6IC83 251 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 GVQW1Q8N7I0 195 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 STPG3Q8N7X2 389 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 VSTM2AQ8TAG5 236 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 SECTM1Q8WVN6 248 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 MARC2Q969Z3 335 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 HSD17B10Q99714 261 aaKnown RBP9.46□□□□□ -0.9
LINC00339-206ENST00000634451 C20orf24Q9BUV8 137 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 ACOT13Q9NPJ3 140 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 FBXL17Q9UF56 701 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 UFC1Q9Y3C8 167 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 AGRNO00468 2067 aa9.46□□□□□ -0.9
LINC00339-206ENST00000634451 DYNC1H1Q14204 4646 aaKnown RBP9.46□□□□□ -0.9
LINC00339-206ENST00000634451 IGKV3-7A0A075B6H7 116 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 TRAV1-2A0A0B4J238 106 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 UPK2O00526 184 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 HIST1H1BP16401 226 aaKnown RBP9.45□□□□□ -0.9
LINC00339-206ENST00000634451 RAB3BP20337 219 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 GALP22466 123 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 TFPI2P48307 235 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 WT1-ASQ06250 92 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 CNIH2Q6PI25 160 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 SLC38A6Q8IZM9 456 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 SPAG16Q8N0X2 631 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 CXorf58Q96LI9 332 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 BET1LQ9NYM9 111 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 ANXA10Q9UJ72 324 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 PKHD1P08F94 4074 aa9.45□□□□□ -0.9
LINC00339-206ENST00000634451 IGHV3OR16-13A0A075B7E8 117 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 IGHV3-74A0A0B4J1X5 117 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 EBAG9O00559 213 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 PDCD5O14737 125 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 DHFRP00374 187 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 PTBP1P26599 531 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00339-206ENST00000634451 FCGR2CP31995 323 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 OR13F1Q8NGS4 319 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 CD300LFQ8TDQ1 290 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 RNF2Q99496 336 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 TMEM140Q9NV12 185 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 TPRKBQ9Y3C4 175 aa9.44□□□□□ -0.9
LINC00339-206ENST00000634451 KIR2DL5BA0A0G2JN68 375 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 KIR2DL5BA0A0G2JPC4 375 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 METTL21EPA6NDL7 271 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 UBE2CO00762 179 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 HRASP01112 189 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 OR13C7P0DN81 318 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 ATF4P18848 351 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms