RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 TMEM140Q9NV12 185 aa13.1□□□□□ -0.31
SPTAN1-214ENST00000628614 TENM3Q9P273 2699 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 UPK2O00526 184 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 DEFA4P12838 97 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 F2RP25116 425 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 HLA-DMAP28067 261 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 OR2B8PP59922 312 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 KLK9Q2XQG4 91 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 MZT2AQ6P582 158 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 C19orf35Q6ZS72 473 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 SBSPONQ8IVN8 264 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 SGPP2Q8IWX5 399 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 Q8N402 240 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 FANCD2OSQ96PS1 177 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 SRSF8Q9BRL6 282 aaKnown RBP13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 KLK9Q9UKQ9 250 aa13.09□□□□□ -0.31
SPTAN1-214ENST00000628614 GPR31O00270 319 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 GGCTO75223 188 aaKnown RBP13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 PGLYRP1O75594 196 aaPredicted RBP13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 GABARAPO95166 117 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 SMIM18P0DKX4 95 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 MYOD1P15172 320 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 ELK1P19419 428 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 S100GP29377 79 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 RCVRNP35243 200 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 THOC7Q6I9Y2 204 aaKnown RBP13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 SNX29P2Q8IUI4 249 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 LYSMD2Q8IV50 215 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 Q8N1Y9 231 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 OR2K2Q8NGT1 345 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 AP3S1Q92572 193 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 EEF1AKMT3Q96AZ1 226 aa13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 QTRT1Q9BXR0 403 aaKnown RBP13.08□□□□□ -0.32
SPTAN1-214ENST00000628614 TRAV3A0A0B4J244 114 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 CGB1A6NKQ9 187 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 MARCH11A6NNE9 402 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 PPP5D1E7EU14 171 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 HPGDSO60760 199 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 NDUFB8O95169 186 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 REG1AP05451 166 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 IGHV4-30-4P0DP06 118 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 TSPAN5P62079 268 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 LPCAT3Q6P1A2 487 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 GTSCR1Q86UQ5 136 aa13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 DGCR14Q96DF8 476 aaKnown RBP13.07□□□□□ -0.32
SPTAN1-214ENST00000628614 IGLV11-55A0A075B6I3 123 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 IGLC7A0M8Q6 106 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 A8MZ25 164 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 FAM25AB3EWG3 89 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 FAM25CB3EWG5 89 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 FAM25GB3EWG6 89 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 CYB5BO43169 146 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 CTF1Q16619 201 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 HSD17B13Q7Z5P4 300 aaPredicted RBP13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 CADM3Q8N126 398 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 FCAMRQ8WWV6 532 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 CXorf58Q96LI9 332 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 CCDC140Q96MF4 163 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 ZMAT4Q9H898 229 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 DMRT1Q9Y5R6 373 aa13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 KMT2CQ8NEZ4 4911 aaKnown RBP13.06□□□□□ -0.32
SPTAN1-214ENST00000628614 TRBV7-1A0A0A6YYK4 115 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 LGALS9O00182 355 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 IGHV3-23P01764 117 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 RPA2P15927 270 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 ARL3P36405 182 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 LPAR6P43657 344 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 MECP2P51608 486 aaKnown RBP13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 CLEC19AQ6UXS0 136 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 GPHB5Q86YW7 130 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 DYNLRB2Q8TF09 96 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 RCHY1Q96PM5 261 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 NAA50Q9GZZ1 169 aaKnown RBP13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 FAM212BQ9NTI7 297 aaPredicted RBP13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 THYN1Q9P016 225 aa13.05□□□□□ -0.32
SPTAN1-214ENST00000628614 STAB2Q8WWQ8 2551 aa13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 OR2C1O95371 312 aa13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 KRASP01116 189 aa13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 HLA-AP01891 365 aaKnown RBP13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 TRAPPC2P0DI81 140 aa13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 TRAPPC2BP0DI82 140 aa13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 ZNF182P17025 639 aaPredicted RBP13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 PHLDA2Q53GA4 152 aa13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 GPR107Q5VW38 600 aa13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 OR1L8Q8NGR8 309 aa13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 THAP7Q9BT49 309 aaPredicted RBP13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 MRPS26Q9BYN8 205 aaKnown RBP13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 C19orf73Q9NVV2 129 aa13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 S4R3C0 116 aa13.04□□□□□ -0.32
SPTAN1-214ENST00000628614 IZUMO1RA6ND01 250 aa13.03□□□□□ -0.32
SPTAN1-214ENST00000628614 MFSD2BA6NFX1 497 aa13.03□□□□□ -0.32
SPTAN1-214ENST00000628614 C2orf70A6NJV1 201 aa13.03□□□□□ -0.32
SPTAN1-214ENST00000628614 SNAPC5O75971 98 aa13.03□□□□□ -0.32
SPTAN1-214ENST00000628614 G6PCP35575 357 aa13.03□□□□□ -0.32
SPTAN1-214ENST00000628614 UCP3P55916 312 aa13.03□□□□□ -0.32
SPTAN1-214ENST00000628614 CD300EQ496F6 205 aaPredicted RBP13.03□□□□□ -0.32
SPTAN1-214ENST00000628614 FAM106AQ4KMX7 169 aa13.03□□□□□ -0.32
SPTAN1-214ENST00000628614 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
SPTAN1-214ENST00000628614 ADAMTSL5Q6ZMM2 481 aa13.03□□□□□ -0.32
SPTAN1-214ENST00000628614 LAX1Q8IWV1 398 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms