RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	ZBTB34	Q8NCN2	500 aa		12.02	□□□□□ -0.48
SMTN-223	ENST00000619644	MDS2	Q8NDY4	140 aa		12.02	□□□□□ -0.48
SMTN-223	ENST00000619644	GMPPA	Q96IJ6	420 aa	Predicted RBP	12.02	□□□□□ -0.48
SMTN-223	ENST00000619644	CXXC4	Q9H2H0	198 aa		12.02	□□□□□ -0.48
SMTN-223	ENST00000619644	HCFC1	P51610	2035 aa		12.02	□□□□□ -0.49
SMTN-223	ENST00000619644	PDE6D	O43924	150 aa		12.02	□□□□□ -0.49
SMTN-223	ENST00000619644	COMP	P49747	757 aa	Predicted RBP	12.02	□□□□□ -0.49
SMTN-223	ENST00000619644	ERVK-16	P61578	105 aa		12.02	□□□□□ -0.49
SMTN-223	ENST00000619644	TMEM178A	Q8NBL3	297 aa		12.02	□□□□□ -0.49
SMTN-223	ENST00000619644	SAMD10	Q9BYL1	202 aa		12.02	□□□□□ -0.49
SMTN-223	ENST00000619644	SPRY4	Q9C004	299 aa		12.02	□□□□□ -0.49
SMTN-223	ENST00000619644		F2Z2F3	143 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	RRH	O14718	337 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	ARL14EPL	P0DKL9	152 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	ZNRF1	Q8ND25	227 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	SLC35E1	Q96K37	410 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	TRAV3	A0A0B4J244	114 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	C15orf62	A8K5M9	175 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	PMS2P5	A8MQ11	134 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644		F6UZH7	168 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	ACTL6B	O94805	426 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	KITLG	P21583	273 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	MMD	Q15546	238 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	GABRA6	Q16445	453 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	RNF114	Q9Y508	228 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	SRSF6	Q13247	344 aa	Known RBP	12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	FAM214B	Q7L5A3	538 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	BAGE3	Q86Y29	109 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	BAGE2	Q86Y30	109 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	C11orf53	Q8IXP5	236 aa		12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	HSD17B10	Q99714	261 aa	Known RBP	12.01	□□□□□ -0.49
SMTN-223	ENST00000619644	CACNA1H	O95180	2353 aa		12	□□□□□ -0.49
SMTN-223	ENST00000619644	TRBV20OR9-2	A0A075B6H5	130 aa		12	□□□□□ -0.49
SMTN-223	ENST00000619644	AQP7	O14520	342 aa		12	□□□□□ -0.49
SMTN-223	ENST00000619644	ESD	P10768	282 aa		12	□□□□□ -0.49
SMTN-223	ENST00000619644	PRDX2	P32119	198 aa		12	□□□□□ -0.49
SMTN-223	ENST00000619644	MRPL18	Q9H0U6	180 aa	Known RBP	12	□□□□□ -0.49
SMTN-223	ENST00000619644	LAMA5	O15230	3695 aa		12	□□□□□ -0.49
SMTN-223	ENST00000619644	SPINK4	O60575	86 aa		12	□□□□□ -0.49
SMTN-223	ENST00000619644	CECR9	P0C854	216 aa		12	□□□□□ -0.49
SMTN-223	ENST00000619644	FAM201A	Q5SY85	155 aa		12	□□□□□ -0.49
SMTN-223	ENST00000619644	DEFB108B	Q8NET1	73 aa		12	□□□□□ -0.49
SMTN-223	ENST00000619644	TPR	P12270	2363 aa	Known RBP	12	□□□□□ -0.49
SMTN-223	ENST00000619644	ZNF718	Q3SXZ3	478 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	CD177	Q8N6Q3	437 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	FAM103A1	Q9BTL3	118 aa	Known RBP	11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	FBXL7	Q9UJT9	491 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	PLCE1	Q9P212	2302 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	ARFGEF3	Q5TH69	2177 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	TMEM265	A0A087WTH1	108 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	SCO2	A0A1W2PP80	73 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	KRTDAP	P60985	99 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	ZNF90	Q03938	601 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	INO80C	Q6PI98	192 aa	Predicted RBP	11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	MS4A5	Q9H3V2	200 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	KCNIP2	Q9NS61	270 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	YLPM1	P49750	1951 aa	Known RBP	11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	NKX2-8	O15522	239 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	STPG4	Q8N801	248 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	OR4B1	Q8NGF8	309 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	S1PR3	Q99500	378 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	TNC	P24821	2201 aa		11.99	□□□□□ -0.49
SMTN-223	ENST00000619644	NDUFB8	O95169	186 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	TIMP3	P35625	211 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644		Q6ZT83	130 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	RNASE8	Q8TDE3	154 aa	Known RBP	11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	DCHS1	Q96JQ0	3298 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	KMT2E	Q8IZD2	1858 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	SPTBN2	O15020	2390 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	SPRY3	O43610	288 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	OR10G8	Q8NGN5	311 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	C20orf202	A1L168	122 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	SLC17A3	O00476	420 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644		P0C879	139 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	MYOD1	P15172	320 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	DUT	P33316	252 aa	Known RBP	11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	ZNF83	P51522	516 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	FAM122A	Q96E09	287 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	WDR83OS	Q9Y284	106 aa		11.98	□□□□□ -0.49
SMTN-223	ENST00000619644	TTC28	Q96AY4	2481 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	DIRC3	C9JPN6	131 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	SPATA45	Q537H7	98 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	TREML4	Q6UXN2	200 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	DEFB123	Q8N688	67 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	SIGLECL1	Q8N7X8	197 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	C9orf106	Q8NAJ2	232 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	ENY2	Q9NPA8	101 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	OR5G3	P0C626	314 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	CD59	P13987	128 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	RBX1	P62877	108 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	RPP30	P78346	268 aa	Known RBP	11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	UTF1	Q5T230	341 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	SPATA31B1P	Q5VZV4	182 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644		Q8N976	141 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	OR1L6	Q8NGR2	347 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	HES4	Q9HCC6	221 aa		11.97	□□□□□ -0.49
SMTN-223	ENST00000619644	FCN1	O00602	326 aa		11.96	□□□□□ -0.49
SMTN-223	ENST00000619644	FRMD6-AS1	P0C7T7	363 aa		11.96	□□□□□ -0.49
SMTN-223	ENST00000619644	CTRL	P40313	264 aa		11.96	□□□□□ -0.49
SMTN-223	ENST00000619644	KRTCAP3	Q53RY4	240 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms