RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 RPL35AP18077 110 aaKnown RBP3.27□□□□□ -1.89
SNCA-213ENST00000618500 PRKACGP22612 351 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 CALB2P22676 271 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 MAPK3P27361 379 aaPredicted RBP3.27□□□□□ -1.89
SNCA-213ENST00000618500 ATP6V1E1P36543 226 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 RPL27AP46776 148 aaKnown RBP3.27□□□□□ -1.89
SNCA-213ENST00000618500 TAS2R43P59537 309 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 RPS11P62280 158 aaKnown RBP eCLIP3.27□□□□□ -1.89
SNCA-213ENST00000618500 RELQ04864 619 aaPredicted RBP3.27□□□□□ -1.89
SNCA-213ENST00000618500 MED21Q13503 144 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 TTC32Q5I0X7 151 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 AWAT2Q6E213 333 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 CLEC19AQ6UXS0 136 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 C12orf4Q9NQ89 552 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 OR1A1Q9P1Q5 309 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 AASSQ9UDR5 926 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 UBQLN2Q9UHD9 624 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 MRPS7Q9Y2R9 242 aaKnown RBP3.27□□□□□ -1.89
SNCA-213ENST00000618500 IGKV1-6A0A0C4DH72 117 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 A0A1W2PP11 408 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 UBE2QL1A1L167 161 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 RBFOX2O43251 390 aaKnown RBP eCLIP3.26□□□□□ -1.89
SNCA-213ENST00000618500 HOXA1P49639 335 aaPredicted RBP3.26□□□□□ -1.89
SNCA-213ENST00000618500 MUL1Q969V5 352 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 UPK3BQ9BT76 320 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 C1QTNF4Q9BXJ3 329 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 RDH8Q9NYR8 311 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 ARL2BPQ9Y2Y0 163 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 HMCN2Q8NDA2 5059 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 A0A1B0GW64 132 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 M0R129 80 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 RPL11P62913 178 aaKnown RBP3.26□□□□□ -1.89
SNCA-213ENST00000618500 DEFA5Q01523 94 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 ZNF773Q6PK81 442 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 ZNF705AQ6ZN79 300 aaPredicted RBP3.26□□□□□ -1.89
SNCA-213ENST00000618500 H1FOOQ8IZA3 346 aaPredicted RBP3.26□□□□□ -1.89
SNCA-213ENST00000618500 ZNF485Q8NCK3 441 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 OR4S2Q8NH73 311 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 PGLYRP3Q96LB9 341 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 PDCD1LG2Q9BQ51 273 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 TMEM231Q9H6L2 316 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 ZNF446Q9NWS9 450 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 TBC1D24Q9ULP9 559 aa3.26□□□□□ -1.89
SNCA-213ENST00000618500 CGB1A6NKQ9 187 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 ZNF705FA8MVS1 300 aaPredicted RBP3.25□□□□□ -1.89
SNCA-213ENST00000618500 E9PI62 339 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 CRTAPO75718 401 aaPredicted RBP3.25□□□□□ -1.89
SNCA-213ENST00000618500 ZNF705DP0CH99 300 aaPredicted RBP3.25□□□□□ -1.89
SNCA-213ENST00000618500 ZNF705BP0CI00 300 aaPredicted RBP3.25□□□□□ -1.89
SNCA-213ENST00000618500 DCKP27707 260 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 PAFAH1B2P68402 229 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 RBM48Q5RL73 367 aaKnown RBP3.25□□□□□ -1.89
SNCA-213ENST00000618500 TMPRSS11AQ6ZMR5 421 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 CEACAM19Q7Z692 300 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 ZDHHC13Q8IUH4 622 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 UBE2DNLQ8IWF7 75 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 ZNF114Q8NC26 417 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 TMEM116Q8NCL8 245 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 OR52I1Q8NGK6 324 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 ZNRF2Q8NHG8 242 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 SLC7A6OSQ96CW6 309 aaPredicted RBP3.25□□□□□ -1.89
SNCA-213ENST00000618500 DERL3Q96Q80 235 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 FAT3Q8TDW7 4589 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 TRAV8-7A0A075B6U6 113 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 IGLC7A0M8Q6 106 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 LIMS3P0CW19 117 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 LIMS4P0CW20 117 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 HLA-GP17693 338 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 SCAND1P57086 179 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 OR2B8PP59922 312 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 DNAL1Q4LDG9 190 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 PLET1Q6UQ28 207 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 DUSP18Q8NEJ0 188 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 CMTM3Q96MX0 182 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 HSD17B10Q99714 261 aaKnown RBP3.25□□□□□ -1.89
SNCA-213ENST00000618500 CIB1Q99828 191 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 OR2D2Q9H210 308 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 MED4Q9NPJ6 270 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 AK3Q9UIJ7 227 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 RFNGQ9Y644 331 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 ACTL6BO94805 426 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 CLEC3BP05452 202 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 SPART-AS1P0CW21 52 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 C4BPBP20851 252 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 Q5VSD8 79 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 SPATA31B1PQ5VZV4 182 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 SSX9Q7RTT3 188 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 SYT8Q8NBV8 401 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 CLRN3Q8NCR9 226 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 FRZBQ92765 325 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 ZNF503Q96F45 646 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 GPHA2Q96T91 129 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 TMEM59Q9BXS4 323 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 ARGLU1Q9NWB6 273 aaPredicted RBP3.25□□□□□ -1.89
SNCA-213ENST00000618500 CELA1Q9UNI1 258 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 DIMT1Q9UNQ2 313 aaKnown RBP3.25□□□□□ -1.89
SNCA-213ENST00000618500 PRELID3BQ9Y3B1 194 aa3.25□□□□□ -1.89
SNCA-213ENST00000618500 A0A0A6YYD4 124 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 ZNF320A2RRD8 509 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 DPPA5A6NC42 116 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms