RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SLC24A4Q8NFF2 622 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 TVP23CQ96ET8 276 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 A0A087WWC5 75 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 SRRM4A7MD48 611 aaKnown RBP12.82□□□□□ -0.36
NR1H3-235ENST00000616973 SEC14L6B5MCN3 397 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 FNDC10F2Z333 226 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 H0YJW9 148 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 NPY1RP25929 384 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 OPRK1P41145 380 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 ATP5IP56385 69 aaPredicted RBP12.82□□□□□ -0.36
NR1H3-235ENST00000616973 HNF4GQ14541 408 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 TMEM249Q2WGJ8 235 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 RNF212Q495C1 297 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 ST6GALNAC6Q969X2 333 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 NIPSNAP3BQ9BS92 247 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 SLC25A22Q9H936 323 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 MLXQ9UH92 298 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 MT-ND4LP03901 98 aa12.81□□□□□ -0.36
NR1H3-235ENST00000616973 IFNA4P05014 189 aa12.81□□□□□ -0.36
NR1H3-235ENST00000616973 OR9G1Q8NH87 305 aa12.81□□□□□ -0.36
NR1H3-235ENST00000616973 RAB1CQ92928 201 aa12.81□□□□□ -0.36
NR1H3-235ENST00000616973 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
NR1H3-235ENST00000616973 HIST1H2BAQ96A08 127 aa12.81□□□□□ -0.36
NR1H3-235ENST00000616973 ROS1P08922 2347 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 CRYBA1P05813 215 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 SFTPCP11686 197 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 MAS1LP35410 378 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 CDSNQ15517 529 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 PDPNQ86YL7 162 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 OR10X1Q8NGY0 326 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 NABP2Q9BQ15 211 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 PCGF1Q9BSM1 259 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 NPVFQ9HCQ7 196 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 KCNIP2Q9NS61 270 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 LSM4Q9Y4Z0 139 aaKnown RBP12.8□□□□□ -0.36
NR1H3-235ENST00000616973 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
NR1H3-235ENST00000616973 IGHV2-70P01814 119 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 SAA1P0DJI8 122 aaPredicted RBP12.8□□□□□ -0.36
NR1H3-235ENST00000616973 IGHV1-8P0DP01 117 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 CEBPGP53567 150 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 C11orf42Q8N5U0 333 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 OR4A5Q8NH83 315 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 PLEKHA3Q9HB20 300 aa12.8□□□□□ -0.36
NR1H3-235ENST00000616973 RALYQ9UKM9 306 aaKnown RBP12.8□□□□□ -0.36
NR1H3-235ENST00000616973 PKDREJQ9NTG1 2253 aa12.79□□□□□ -0.36
NR1H3-235ENST00000616973 TEX50A0A1B0GTY4 177 aa12.79□□□□□ -0.36
NR1H3-235ENST00000616973 SMCO3A2RU48 225 aa12.79□□□□□ -0.36
NR1H3-235ENST00000616973 B4DEV8 164 aa12.79□□□□□ -0.36
NR1H3-235ENST00000616973 CA2P00918 260 aa12.79□□□□□ -0.36
NR1H3-235ENST00000616973 COL8A2P25067 703 aa12.79□□□□□ -0.36
NR1H3-235ENST00000616973 CDC34P49427 236 aaPredicted RBP12.79□□□□□ -0.36
NR1H3-235ENST00000616973 PNRC1Q12796 327 aaPredicted RBP12.79□□□□□ -0.36
NR1H3-235ENST00000616973 OR4C13Q8NGP0 309 aa12.79□□□□□ -0.36
NR1H3-235ENST00000616973 TNFRSF14Q92956 283 aa12.79□□□□□ -0.36
NR1H3-235ENST00000616973 FLYWCH2Q96CP2 140 aaKnown RBP12.79□□□□□ -0.36
NR1H3-235ENST00000616973 NEIL1Q96FI4 390 aaPredicted RBP12.79□□□□□ -0.36
NR1H3-235ENST00000616973 MGST2Q99735 147 aa12.79□□□□□ -0.36
NR1H3-235ENST00000616973 GGTLC1Q9BX51 225 aa12.79□□□□□ -0.36
NR1H3-235ENST00000616973 PSMB3P49720 205 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 MEF2BQ02080 365 aaPredicted RBP12.78□□□□□ -0.36
NR1H3-235ENST00000616973 BSXQ3C1V8 233 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 ZNF841Q6ZN19 808 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 HARBI1Q96MB7 349 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 A0A1W2PPE2 198 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 A0A1W2PPH5 198 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 INS-IGF2F8WCM5 200 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 MYOD1P15172 320 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 IL3RAP26951 378 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 CD81P60033 236 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 C2orf83Q53S99 150 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 ARSJQ5FYB0 599 aaPredicted RBP12.78□□□□□ -0.36
NR1H3-235ENST00000616973 VSTM2AQ8TAG5 236 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 ISOC2Q96AB3 205 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 C1orf159Q96HA4 380 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 YPEL4Q96NS1 127 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 TMEM133Q9H2Q1 129 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 PRORYQ9H606 182 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 SIRT7Q9NRC8 400 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 WASHC3Q9Y3C0 194 aa12.78□□□□□ -0.36
NR1H3-235ENST00000616973 TMEM250H0YL14 139 aa12.77□□□□□ -0.37
NR1H3-235ENST00000616973 YIF1AO95070 293 aa12.77□□□□□ -0.37
NR1H3-235ENST00000616973 RBP4P02753 201 aa12.77□□□□□ -0.37
NR1H3-235ENST00000616973 C1QTNF9P0C862 333 aa12.77□□□□□ -0.37
NR1H3-235ENST00000616973 USF1P22415 310 aaPredicted RBP12.77□□□□□ -0.37
NR1H3-235ENST00000616973 RAB13P51153 203 aa12.77□□□□□ -0.37
NR1H3-235ENST00000616973 TMEM167AQ8TBQ9 72 aa12.77□□□□□ -0.37
NR1H3-235ENST00000616973 TMPRSS5Q9H3S3 457 aa12.77□□□□□ -0.37
NR1H3-235ENST00000616973 PXMP4Q9Y6I8 212 aa12.77□□□□□ -0.37
NR1H3-235ENST00000616973 PIEZO1Q92508 2521 aa12.77□□□□□ -0.37
NR1H3-235ENST00000616973 HMGB3O15347 200 aaKnown RBP12.76□□□□□ -0.37
NR1H3-235ENST00000616973 EIF3GO75821 320 aaKnown RBP eCLIP12.76□□□□□ -0.37
NR1H3-235ENST00000616973 OR2C1O95371 312 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 MC5RP33032 325 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 CTAG1AP78358 180 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 TEPPQ6URK8 271 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 TGIF2LXQ8IUE1 241 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 OR1L8Q8NGR8 309 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 C8orf46Q8TAG6 207 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms