RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	HEYL	Q9NQ87	328 aa	Predicted RBP	11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	DYSF	O75923	2080 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CEP295	Q9C0D2	2601 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CUL9	Q8IWT3	2517 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	TPR	P12270	2363 aa	Known RBP	11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	PMS2P5	A8MQ11	134 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	ADH4	P08319	380 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	GZMH	P20718	246 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	ZNF66	Q6ZN08	573 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	NPCDR1	Q9BY65	106 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	TRAV38-1	A0A0B4J264	116 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	IFNA1	P01562	189 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	ABHD12	Q8N2K0	398 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	SNRNP40	Q96DI7	357 aa	Known RBP	11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	HINT2	Q9BX68	163 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	HIPK2	Q9H2X6	1198 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	TACC2	O95359	2948 aa		11.5	□□□□□ -0.57
CACNA1C-231	ENST00000616390	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	MBD3L3	A6NE82	208 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	MGST3	O14880	152 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	TM4SF5	O14894	197 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	SIAH2	O43255	324 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CLEC3B	P05452	202 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	TM4SF20	Q53R12	229 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	NOL4L	Q96MY1	436 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	DIRC2	Q96SL1	478 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	PATZ1	Q9HBE1	687 aa	Known RBP	11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	MUC6	Q6W4X9	2439 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	DSCAML1	Q8TD84	2053 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	RELN	P78509	3460 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	TGOLN2	O43493	480 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	PAGE4	O60829	102 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	COL8A2	P25067	703 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	MEF2B	Q02080	365 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	MZT1	Q08AG7	82 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390		Q8TCH9	128 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CACNG8	Q8WXS5	425 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	SNX22	Q96L94	193 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	VPS25	Q9BRG1	176 aa		11.49	□□□□□ -0.57
CACNA1C-231	ENST00000616390	TANC2	Q9HCD6	1990 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	RRH	O14718	337 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	PSMB3	P49720	205 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	COMP	P49747	757 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	PPP1R35	Q8TAP8	253 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CIB3	Q96Q77	187 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	S1PR3	Q99500	378 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CCL13	Q99616	98 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	SDF2L1	Q9HCN8	221 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CALY	Q9NYX4	217 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	OR6C3	Q9NZP0	311 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	ZNRD1	Q9P1U0	126 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390		A0A087WWC5	75 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	C15orf62	A8K5M9	175 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	GYPA	P02724	150 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	MYOD1	P15172	320 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	RTP5	Q14D33	572 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	TIMM23B	Q5SRD1	257 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	WDR25	Q64LD2	544 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	MALSU1	Q96EH3	234 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	PCGF1	Q9BSM1	259 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	TMEM204	Q9BSN7	226 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	DOK5	Q9P104	306 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390	LAMP3	Q9UQV4	416 aa		11.48	□□□□□ -0.57
CACNA1C-231	ENST00000616390		M0R143	59 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	HPRT1	P00492	218 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	RPLP1	P05386	114 aa	Known RBP	11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	LOXL3	P58215	753 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	ERVK-16	P61578	105 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	ATP6V1F	Q16864	119 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	LYG1	Q8N1E2	194 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	ELOVL1	Q9BW60	279 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	HIF1AN	Q9NWT6	349 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CTXND1	A0A1B0GTU2	59 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	GLRX	P35754	106 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CCL8	P80075	99 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	NBAS	A2RRP1	2371 aa		11.47	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CLDN34	H7C241	214 aa		11.46	□□□□□ -0.57
CACNA1C-231	ENST00000616390	TNFAIP6	P98066	277 aa	Predicted RBP	11.46	□□□□□ -0.57
CACNA1C-231	ENST00000616390	GFI1B	Q5VTD9	330 aa		11.46	□□□□□ -0.57
CACNA1C-231	ENST00000616390	CST9LP1	Q5W188	147 aa		11.46	□□□□□ -0.57
CACNA1C-231	ENST00000616390	FAM216B	Q8N7L0	139 aa		11.46	□□□□□ -0.57
CACNA1C-231	ENST00000616390	LRBA	P50851	2863 aa		11.46	□□□□□ -0.57
CACNA1C-231	ENST00000616390	S100A2	P29034	98 aa		11.46	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TRAT1	Q6PIZ9	186 aa		11.46	□□□□□ -0.58
CACNA1C-231	ENST00000616390	FAM90A1	Q86YD7	464 aa		11.46	□□□□□ -0.58
CACNA1C-231	ENST00000616390	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.46	□□□□□ -0.58
CACNA1C-231	ENST00000616390	IFI27L2	Q9H2X8	130 aa		11.46	□□□□□ -0.58
CACNA1C-231	ENST00000616390	PARL	Q9H300	379 aa		11.46	□□□□□ -0.58
CACNA1C-231	ENST00000616390	JPT1	Q9UK76	154 aa		11.46	□□□□□ -0.58
CACNA1C-231	ENST00000616390	NKX6-3	A6NJ46	265 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	CEACAM4	O75871	244 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	PTTG1IP	P53801	180 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms