RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 RAB27BO00194 218 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 NUPL2O15504 423 aaKnown RBP4.78□□□□□ -1.64
MUC1-227ENST00000615517 FKBP6O75344 327 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 KBTBD11O94819 623 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 APOHP02749 345 aaPredicted RBP4.78□□□□□ -1.64
MUC1-227ENST00000615517 GBX2P52951 348 aaPredicted RBP4.78□□□□□ -1.64
MUC1-227ENST00000615517 TPBGQ13641 420 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 OR2G6Q5TZ20 316 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 FAM222AQ5U5X8 452 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 Q6ZRN7 208 aaPredicted RBP4.78□□□□□ -1.64
MUC1-227ENST00000615517 MFSD4AQ8N468 514 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 C15orf53Q8NAA6 179 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 TMEM167AQ8TBQ9 72 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 VN1R17PQ8TDU5 208 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 OR10C1Q96KK4 312 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 KCNK15Q9H427 330 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 IMPAD1Q9NX62 359 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 ERVK13-1Q9NX77 482 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 TNXBP22105 4242 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 A0A1W2PPK0 400 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 IGLC7A0M8Q6 106 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 DNASE2O00115 360 aaPredicted RBP4.77□□□□□ -1.65
MUC1-227ENST00000615517 FCGR3BO75015 233 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 CTSGP08311 255 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 RPS11P62280 158 aaKnown RBP eCLIP4.77□□□□□ -1.65
MUC1-227ENST00000615517 PAFAH1B2P68402 229 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 MRPL28Q13084 256 aaKnown RBP4.77□□□□□ -1.65
MUC1-227ENST00000615517 PLA2G7Q13093 441 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 ARFRP1Q13795 201 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 OXA1LQ15070 435 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 IGSF11Q5DX21 431 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 ACTL10Q5JWF8 245 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 UBE2UQ5VVX9 321 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 CDPF1Q6NVV7 123 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 SPSB3Q6PJ21 355 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 ZNF705AQ6ZN79 300 aaPredicted RBP4.77□□□□□ -1.65
MUC1-227ENST00000615517 ST8SIA2Q92186 375 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 CCDC124Q96CT7 223 aaKnown RBP4.77□□□□□ -1.65
MUC1-227ENST00000615517 DGCR14Q96DF8 476 aaKnown RBP4.77□□□□□ -1.65
MUC1-227ENST00000615517 ADTRPQ96IZ2 230 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 CMTM3Q96MX0 182 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 NEU1Q99519 415 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 CIB1Q99828 191 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 Q9H8V8 135 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 PTTG2Q9NZH5 202 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 XCL2Q9UBD3 114 aa4.77□□□□□ -1.65
MUC1-227ENST00000615517 TRAV14DV4A0A0A6YYC5 116 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 TRAV2A0A0B4J234 112 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 IGHV3-66A0A0C4DH42 116 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 TMEM238LA0A1B0GVL6 79 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 AQP12BA6NM10 295 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 ZNF705FA8MVS1 300 aaPredicted RBP4.76□□□□□ -1.65
MUC1-227ENST00000615517 TRDCB7Z8K6 153 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 K7EQG2 157 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 SOCS1O15524 211 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 ZNF705DP0CH99 300 aaPredicted RBP4.76□□□□□ -1.65
MUC1-227ENST00000615517 ZNF705BP0CI00 300 aaPredicted RBP4.76□□□□□ -1.65
MUC1-227ENST00000615517 SRMP19623 302 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 CELP19835 753 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 GYS2P54840 703 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 BRWD1-AS2P59051 145 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 OR2B8PP59922 312 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 RPL30P62888 115 aaKnown RBP4.76□□□□□ -1.65
MUC1-227ENST00000615517 UNC119Q13432 240 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 OR2B11Q5JQS5 317 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 RPL22L1Q6P5R6 122 aaKnown RBP4.76□□□□□ -1.65
MUC1-227ENST00000615517 AQP12AQ8IXF9 295 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 CDH26Q8IXH8 852 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 ARHGAP24Q8N264 748 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 SCARB1Q8WTV0 552 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 DCUN1D5Q9BTE7 237 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 TM2D1Q9BX74 207 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 GABARAPL3Q9BY60 117 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 GABARAPL1Q9H0R8 117 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 Q9H3A6 140 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 RIMS4Q9H426 269 aaPredicted RBP4.76□□□□□ -1.65
MUC1-227ENST00000615517 VSIRQ9H7M9 311 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 PLEKHJ1Q9NW61 149 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 C21orf62Q9NYP8 219 aa4.76□□□□□ -1.65
MUC1-227ENST00000615517 TRBV6-7A0A0A0MS04 114 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 RPS10-NUDT3A0A1W2PQS6 291 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 TMEM189A5PLL7 270 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 FOXI3A8MTJ6 420 aaPredicted RBP4.75□□□□□ -1.65
MUC1-227ENST00000615517 BET1O15155 118 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 OGG1O15527 345 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 ST8SIA3O43173 380 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 NUDT3O95989 172 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 LALBAP00709 142 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 ZNF688P0C7X2 276 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 LIMS3P0CW19 117 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 LIMS4P0CW20 117 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 HLA-GP17693 338 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 CRHBPP24387 322 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 RPL8P62917 257 aaKnown RBP4.75□□□□□ -1.65
MUC1-227ENST00000615517 QRFPP83859 136 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 UBAC2Q8NBM4 344 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 DUSP18Q8NEJ0 188 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 OR10W1Q8NGF6 305 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms