RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TTC9CQ8N5M4 171 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 SHANK3Q9BYB0 1731 aa14.78□□□□□ -0.04
HMGXB3-206ENST00000613459 C19orf67A6NJJ6 358 aa14.78□□□□□ -0.04
HMGXB3-206ENST00000613459 CGB1A6NKQ9 187 aa14.78□□□□□ -0.04
HMGXB3-206ENST00000613459 TRBV20OR9-2A0A075B6H5 130 aa14.78□□□□□ -0.04
HMGXB3-206ENST00000613459 APOBEC3AP31941 199 aaPredicted RBP14.78□□□□□ -0.04
HMGXB3-206ENST00000613459 GOLT1AQ6ZVE7 132 aa14.78□□□□□ -0.04
HMGXB3-206ENST00000613459 RNASEH2CQ8TDP1 164 aaKnown RBP14.78□□□□□ -0.04
HMGXB3-206ENST00000613459 SPRED2Q7Z698 418 aa14.78□□□□□ -0.04
HMGXB3-206ENST00000613459 NIT1Q86X76 327 aa14.78□□□□□ -0.04
HMGXB3-206ENST00000613459 RCC1LQ96I51 464 aaKnown RBP14.78□□□□□ -0.04
HMGXB3-206ENST00000613459 NPFFO15130 113 aa14.77□□□□□ -0.04
HMGXB3-206ENST00000613459 RNASE1P07998 156 aaKnown RBP14.77□□□□□ -0.04
HMGXB3-206ENST00000613459 C19orf48Q6RUI8 117 aa14.77□□□□□ -0.04
HMGXB3-206ENST00000613459 LINC00305Q7Z4B0 112 aa14.77□□□□□ -0.04
HMGXB3-206ENST00000613459 LRTM2Q8N967 370 aa14.77□□□□□ -0.04
HMGXB3-206ENST00000613459 TBL2Q9Y4P3 447 aaKnown RBP14.77□□□□□ -0.04
HMGXB3-206ENST00000613459 NEU4Q8WWR8 484 aaPredicted RBP14.77□□□□□ -0.04
HMGXB3-206ENST00000613459 SRP19P09132 144 aaKnown RBP14.77□□□□□ -0.05
HMGXB3-206ENST00000613459 CDCP2Q5VXM1 449 aa14.77□□□□□ -0.05
HMGXB3-206ENST00000613459 THY1P04216 161 aa14.77□□□□□ -0.05
HMGXB3-206ENST00000613459 RTN4RQ9BZR6 473 aa14.77□□□□□ -0.05
HMGXB3-206ENST00000613459 ZNF56Q15929 161 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 TUBA4BQ9H853 241 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 PPP1R32Q7Z5V6 425 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 PRELID3AQ96N28 172 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 TMEM160Q9NX00 188 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 A0A0G2JLM5 398 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 HOXA5P20719 270 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 PNKDQ8N490 385 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 MRAP2Q96G30 205 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 TIMP4Q99727 224 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 TBR1Q16650 682 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 C1QTNF5Q9BXJ0 243 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 JKAMPQ9P055 326 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 FAM169BQ8N8A8 192 aa14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 ZNF703Q9H7S9 590 aaPredicted RBP14.76□□□□□ -0.05
HMGXB3-206ENST00000613459 FAM181BA6NEQ2 426 aa14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 CIARTQ8N365 385 aaPredicted RBP14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 SSBP3Q9BWW4 388 aaPredicted RBP14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 FBLN5Q9UBX5 448 aa14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 SP9P0CG40 484 aa14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 ASIPP42127 132 aa14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 NUTF2P61970 127 aaKnown RBP14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 TGIF1Q15583 401 aa14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 ZNF638Q14966 1978 aaKnown RBP14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 AICDAQ9GZX7 198 aa14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 IGKV3D-11A0A0A0MRZ8 115 aa14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 KLK15Q9H2R5 256 aa14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 RPRMQ9NS64 109 aa14.75□□□□□ -0.05
HMGXB3-206ENST00000613459 NBEAP1P0C6P0 100 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 DMRTA1Q5VZB9 504 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 DPM3Q9P2X0 92 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 RRHO14718 337 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 COL11A2P13942 1736 aaPredicted RBP14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 PAX1P15863 534 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 TEX45Q8NA69 505 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 TMEM101Q96IK0 257 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 BEX4Q9NWD9 120 aaPredicted RBP14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 CHCHD2Q9Y6H1 151 aaPredicted RBP14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 TRIP12Q14669 1992 aaPredicted RBP14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 PEX7O00628 323 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 TMEM106BQ9NUM4 274 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 C12orf77C9JDV5 145 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 FOXL2P58012 376 aa14.74□□□□□ -0.05
HMGXB3-206ENST00000613459 ARID1AO14497 2285 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 IGKV3D-15A0A087WSY6 115 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 IZUMO1RA6ND01 250 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 IGKV3-15P01624 115 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 APOHP02749 345 aaPredicted RBP14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 LINC00114Q6XXX2 140 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 SGK494Q96LW2 274 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 WNT10AQ9GZT5 417 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 SCN3AQ9NY46 2000 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 A0A1B0GWB2 263 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 RPP21Q9H633 154 aaKnown RBP14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 SDF2L1Q9HCN8 221 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 MYO16Q9Y6X6 1858 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 ATG2BQ96BY7 2078 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 ATAD5Q96QE3 1844 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 KNTC1P50748 2209 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 BEND2Q8NDZ0 799 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 GPHA2Q96T91 129 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 SPCS1Q9Y6A9 102 aa14.73□□□□□ -0.05
HMGXB3-206ENST00000613459 A0A0G2JK05 382 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 A0A1B0GUT8 65 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 H3BRM9 83 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 ATP5J2P56134 94 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 GTF3AQ92664 365 aaKnown RBP14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 KBTBD11-OT1A0A1B0GTJ5 212 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 CEACAM4O75871 244 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 LURAP1LQ8IV03 231 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 ZNF418Q8TF45 676 aaPredicted RBP14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 C2orf88Q9BSF0 95 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 CHODLQ9H9P2 273 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 CLDN16Q9Y5I7 305 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 TRAV8-6A0A0B4J262 113 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 SHISA3A0PJX4 238 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 REG1AP05451 166 aa14.72□□□□□ -0.05
HMGXB3-206ENST00000613459 IGLV3-19P01714 112 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms