RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 GALNT14Q96FL9 552 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 SEC22AQ96IW7 307 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 OR4F4Q96R69 305 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 TMEM222Q9H0R3 208 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 SLA2Q9H6Q3 261 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 PRNDQ9UKY0 176 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 TENM1Q9UKZ4 2725 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 A0A1W2PRX2 142 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 H3BUA1 57 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 NDUFB6O95139 128 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 CDS2O95674 445 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 IGKV1-39P01597 117 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 IGKV1D-39P04432 117 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 RPLP1P05386 114 aaKnown RBP11.15□□□□□ -0.62
CTSA-219ENST00000607841 RAB9AP51151 201 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 CCR6P51684 374 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 AKR1C2P52895 323 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 RPL23AP62750 156 aaKnown RBP11.15□□□□□ -0.62
CTSA-219ENST00000607841 TMEM128Q5BJH2 165 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 PRR31Q5SQ13 230 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 HIST2H2BDQ6DRA6 164 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 ZNF695Q8IW36 515 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 OR5T1Q8NG75 326 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 OR4A16Q8NH70 328 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 RNASE11Q8TAA1 199 aaKnown RBP11.15□□□□□ -0.62
CTSA-219ENST00000607841 GLYATL2Q8WU03 294 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 TMEM230Q96A57 120 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 RRNAD1Q96FB5 475 aaKnown RBP11.15□□□□□ -0.62
CTSA-219ENST00000607841 FYTTD1Q96QD9 318 aaKnown RBP11.15□□□□□ -0.62
CTSA-219ENST00000607841 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.62
CTSA-219ENST00000607841 TRAV3A0A0B4J244 114 aa11.14□□□□□ -0.63
CTSA-219ENST00000607841 NUDT19A8MXV4 375 aa11.14□□□□□ -0.63
CTSA-219ENST00000607841 PLA2G10O15496 165 aa11.14□□□□□ -0.63
CTSA-219ENST00000607841 LYRM1O43325 122 aa11.14□□□□□ -0.63
CTSA-219ENST00000607841 SOX15O60248 233 aa11.14□□□□□ -0.63
CTSA-219ENST00000607841 BRI3O95415 125 aa11.14□□□□□ -0.63
CTSA-219ENST00000607841 CDX1P47902 265 aaPredicted RBP11.14□□□□□ -0.63
CTSA-219ENST00000607841 SRPXP78539 464 aa11.14□□□□□ -0.63
CTSA-219ENST00000607841 C10orf55Q5SWW7 151 aa11.14□□□□□ -0.63
CTSA-219ENST00000607841 THOC7Q6I9Y2 204 aaKnown RBP11.14□□□□□ -0.63
CTSA-219ENST00000607841 CENPSQ8N2Z9 138 aa11.14□□□□□ -0.63
CTSA-219ENST00000607841 FAM110DQ8TAY7 271 aaPredicted RBP11.14□□□□□ -0.63
CTSA-219ENST00000607841 RBPMSQ93062 196 aaKnown RBP11.14□□□□□ -0.63
CTSA-219ENST00000607841 UBE2E2Q96LR5 201 aa11.14□□□□□ -0.63
CTSA-219ENST00000607841 SRSF8Q9BRL6 282 aaKnown RBP11.14□□□□□ -0.63
CTSA-219ENST00000607841 ADARB2-AS1A8MUL3 147 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 RBMXL2O75526 392 aaKnown RBP11.13□□□□□ -0.63
CTSA-219ENST00000607841 DHFRP00374 187 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 OR9G9P0C7N8 305 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 APELAP0DMC3 54 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 OR2B8PP59922 312 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 UBE2MP61081 183 aaKnown RBP11.13□□□□□ -0.63
CTSA-219ENST00000607841 ASPHD1Q5U4P2 390 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 TMEM268Q5VZI3 342 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 MZT2BQ6NZ67 158 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 HSD17B13Q7Z5P4 300 aaPredicted RBP11.13□□□□□ -0.63
CTSA-219ENST00000607841 FAM219AQ8IW50 185 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 TTC9CQ8N5M4 171 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 OR1L8Q8NGR8 309 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 OR5B3Q8NH48 314 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 IL22RA2Q969J5 263 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 TMEM56Q96MV1 263 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 QTRT1Q9BXR0 403 aaKnown RBP11.13□□□□□ -0.63
CTSA-219ENST00000607841 KLK15Q9H2R5 256 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 COA4Q9NYJ1 87 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 NSG2Q9Y328 171 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 OR51B2Q9Y5P1 312 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 TMEM56-RWDD3S4R434 201 aa11.13□□□□□ -0.63
CTSA-219ENST00000607841 TEX50A0A1B0GTY4 177 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 HMX3A6NHT5 357 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 C15orf61A6NNL5 157 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 TEX22C9J3V5 150 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 UPK1BO75841 260 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 IGKV1-5P01602 117 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 TRGV3P03979 118 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 TRAPPC2P0DI81 140 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 TRAPPC2BP0DI82 140 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 VAMP1P23763 118 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 BTCP35070 178 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 TPPP2P59282 170 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 TMEM187Q14656 261 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 LCNL1Q6ZST4 164 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 MRPL41Q8IXM3 137 aaKnown RBP11.12□□□□□ -0.63
CTSA-219ENST00000607841 SELENOHQ8IZQ5 122 aaKnown RBP11.12□□□□□ -0.63
CTSA-219ENST00000607841 LGI3Q8N145 548 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 ZNF491Q8N8L2 437 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 KLHL30-AS1Q8NEE0 82 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 TMEM14BQ9NUH8 114 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 ZNF257Q9Y2Q1 563 aa11.12□□□□□ -0.63
CTSA-219ENST00000607841 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
CTSA-219ENST00000607841 NPIPB5A8MRT5 1133 aa11.11□□□□□ -0.63
CTSA-219ENST00000607841 E7EUB6 86 aa11.11□□□□□ -0.63
CTSA-219ENST00000607841 TSPAN15O95858 294 aa11.11□□□□□ -0.63
CTSA-219ENST00000607841 CRYGCP07315 174 aa11.11□□□□□ -0.63
CTSA-219ENST00000607841 MYOD1P15172 320 aa11.11□□□□□ -0.63
CTSA-219ENST00000607841 RAB25P57735 213 aa11.11□□□□□ -0.63
CTSA-219ENST00000607841 SUPT4H1P63272 117 aaKnown RBP11.11□□□□□ -0.63
CTSA-219ENST00000607841 TREML4Q6UXN2 200 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms