RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 NAT8Q9UHE5 227 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 POLR1DQ9Y2S0 133 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 C15orf41Q9Y2V0 281 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 DLG5Q8TDM6 1919 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 MAST2Q6P0Q8 1798 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 ABCC11Q96J66 1382 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 SETD5Q9C0A6 1442 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 TRAPPC13A5PLN9 417 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 MEIS3P1A6NDR6 274 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 H0Y980 276 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 I3L521 148 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 M0QZ92 97 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 PFDN6O15212 129 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 MRPS14O60783 128 aaKnown RBP0.31□□□□□ -2.36
SNORA28-201ENST00000606769 SHBGP04278 402 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 ARL14EPLP0DKL9 152 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 RPS12P25398 132 aaKnown RBP0.31□□□□□ -2.36
SNORA28-201ENST00000606769 PSMB8P28062 276 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 CDC34P49427 236 aaPredicted RBP0.31□□□□□ -2.36
SNORA28-201ENST00000606769 NAA20P61599 178 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 SUPT4H1P63272 117 aaKnown RBP0.31□□□□□ -2.36
SNORA28-201ENST00000606769 EMX1Q04741 257 aaPredicted RBP0.31□□□□□ -2.36
SNORA28-201ENST00000606769 DMTNQ08495 405 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 FAM151BQ6UXP7 276 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 ZNF705AQ6ZN79 300 aaPredicted RBP0.31□□□□□ -2.36
SNORA28-201ENST00000606769 TMEM86BQ8N661 226 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 JOSD2Q8TAC2 188 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 ACOT12Q8WYK0 555 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 SLC7A6Q92536 515 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 DOHHQ9BU89 302 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 PARD6GQ9BYG4 376 aaPredicted RBP0.31□□□□□ -2.36
SNORA28-201ENST00000606769 OR51I1Q9H343 314 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 C8orf4Q9NR00 106 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 SPANXB1Q9NS25 103 aaPredicted RBP0.31□□□□□ -2.36
SNORA28-201ENST00000606769 PAQR5Q9NXK6 330 aaPredicted RBP0.31□□□□□ -2.36
SNORA28-201ENST00000606769 ATP6V1DQ9Y5K8 247 aa0.31□□□□□ -2.36
SNORA28-201ENST00000606769 EIF4G1Q04637 1599 aaKnown RBP0.31□□□□□ -2.36
SNORA28-201ENST00000606769 BRWD1Q9NSI6 2320 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 IGHV1-69-2A0A0G2JMI3 117 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 A0A1B0GW54 56 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 HCRTO43612 131 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 CRPP02741 224 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 CASQ1P31415 396 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 AKR1C3P42330 323 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 OR4D2P58180 307 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 RAB5BP61020 215 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 CDK5R1Q15078 307 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 CD200R1LQ6Q8B3 271 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 LRRN1Q6UXK5 716 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 C1orf158Q8N1D5 194 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 C10orf126Q8N4M7 172 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 OR5B17Q8NGF7 314 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 MBD3L1Q8WWY6 194 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 ANKRD7Q92527 254 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 RAB8BQ92930 207 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 TESCQ96BS2 214 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 DIRAS2Q96HU8 199 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 ADAT1Q9BUB4 502 aaKnown RBP0.3□□□□□ -2.36
SNORA28-201ENST00000606769 XAGE1AQ9HD64 81 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 CMTM6Q9NX76 183 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 AK3Q9UIJ7 227 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 C3orf18Q9UK00 162 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 TIMM9Q9Y5J7 89 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 HECW2Q9P2P5 1572 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 HECW1Q76N89 1606 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 CACNA1BQ00975 2339 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 HEATR5AQ86XA9 2040 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 DCCP43146 1447 aa0.3□□□□□ -2.36
SNORA28-201ENST00000606769 MYOFQ9NZM1 2061 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 RALGAPA2Q2PPJ7 1873 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 ROS1P08922 2347 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 A0A0J9YY10 115 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 TRBV10-2A0A0K0K1G8 114 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 A0A1B0GX78 115 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 IRGMA1A4Y4 181 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 DISC1C4P0D8 188 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 ACOX3O15254 700 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 ORC5O43913 435 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 CREBL2O60519 120 aaPredicted RBP0.29□□□□□ -2.36
SNORA28-201ENST00000606769 IGKV1-5P01602 117 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 IGHV3-7P01780 117 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 MSMBP08118 114 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 RPSAP08865 295 aaKnown RBP0.29□□□□□ -2.36
SNORA28-201ENST00000606769 SRP19P09132 144 aaKnown RBP0.29□□□□□ -2.36
SNORA28-201ENST00000606769 TRGC1P0CF51 173 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 FGF6P10767 208 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 MSNP26038 577 aaKnown RBP0.29□□□□□ -2.36
SNORA28-201ENST00000606769 CSN1S1P47710 185 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 MARCKSL1P49006 195 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 RAB13P51153 203 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 ZNF80P51504 273 aaPredicted RBP0.29□□□□□ -2.36
SNORA28-201ENST00000606769 AP1S1P61966 158 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 POLR2GP62487 172 aaKnown RBP eCLIP0.29□□□□□ -2.36
SNORA28-201ENST00000606769 AKR1C1Q04828 323 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 ZNF846Q147U1 533 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 SURF2Q15527 256 aaPredicted RBP0.29□□□□□ -2.36
SNORA28-201ENST00000606769 CLVS2Q5SYC1 327 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 SYPL2Q5VXT5 272 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 C5orf46Q6UWT4 87 aa0.29□□□□□ -2.36
SNORA28-201ENST00000606769 HIST2H3AQ71DI3 136 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms