RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 AMMECR1LQ6DCA0 310 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 MRPL52Q86TS9 123 aaKnown RBP12.85□□□□□ -0.35
RER1-209ENST00000605895 TUSC5Q8IXB3 177 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 NAA38Q9BRA0 125 aaKnown RBP12.85□□□□□ -0.35
RER1-209ENST00000605895 M0R2Z0 102 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 FCGR3BO75015 233 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 DKK1O94907 266 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 NUDT3O95989 172 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 GABRA2P47869 451 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 SSR4P51571 173 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 EBLN2Q6P2I7 272 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 TMEM136Q6ZRR5 245 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 CDC42EP3Q9UKI2 254 aa12.85□□□□□ -0.35
RER1-209ENST00000605895 CA7P43166 264 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 PSG5Q15238 335 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 MIR17HGQ75NE6 70 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 MOB3BQ86TA1 216 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 GGNQ86UU5 652 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 RPS19BP1Q86WX3 136 aaKnown RBP12.84□□□□□ -0.35
RER1-209ENST00000605895 KLHDC1Q8N7A1 406 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 CHRNA10Q9GZZ6 450 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 TECRQ9NZ01 308 aaKnown RBP12.84□□□□□ -0.35
RER1-209ENST00000605895 WDR83OSQ9Y284 106 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 ROS1P08922 2347 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 HCFC1P51610 2035 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 IGLV3-12A0A075B6K2 115 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 HELTA6NFD8 242 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 USF1P22415 310 aaPredicted RBP12.84□□□□□ -0.35
RER1-209ENST00000605895 C12orf49Q9H741 205 aa12.84□□□□□ -0.35
RER1-209ENST00000605895 RAB29O14966 203 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 ESDP10768 282 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 GDF1P27539 372 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 PCOLCEQ15113 449 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 Q6P435 159 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 Q8NFD4 153 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 OR2Y1Q8NGV0 311 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 SPSB4Q96A44 273 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 SFXN3Q9BWM7 321 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 CST9LQ9H4G1 147 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 ZNF391Q9UJN7 358 aa12.83□□□□□ -0.35
RER1-209ENST00000605895 DYSFO75923 2080 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 COL5A1P20908 1838 aaPredicted RBP12.83□□□□□ -0.36
RER1-209ENST00000605895 C12orf77C9JDV5 145 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 CXorf1O96002 111 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 APCSP02743 223 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 CELA3BP08861 270 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 STAG3L2P0CL84 134 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 STAG3L3P0CL85 134 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 FOXA3P55318 350 aaPredicted RBP12.83□□□□□ -0.36
RER1-209ENST00000605895 CCL7P80098 99 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 LINC00173Q6ZV60 143 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 NINJ1Q92982 152 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 PRDM14Q9GZV8 571 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 YLPM1P49750 1951 aaKnown RBP12.83□□□□□ -0.36
RER1-209ENST00000605895 NCKAP5O14513 1909 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 CADP27708 2225 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 IGHV2-70DA0A0C4DH43 119 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 A0A1W2PQM1 296 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 FAM166BA8MTA8 275 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 NXPH1P58417 271 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 GNG3P63215 75 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 EDDM3AQ14507 147 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 TRIP6Q15654 476 aaKnown RBP12.83□□□□□ -0.36
RER1-209ENST00000605895 PRAMEF5Q5TYX0 476 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 PRAMEF6Q5VXH4 476 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 GGTLC1Q9BX51 225 aa12.83□□□□□ -0.36
RER1-209ENST00000605895 CFAP47Q6ZTR5 3102 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 MUC21A0A0G2JKD1 596 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 MUC21A0A140T8X8 626 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 OR7C2O60412 319 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 CELA3AP09093 270 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 MUC21Q5SSG8 566 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 BCL2L2Q92843 193 aaPredicted RBP12.82□□□□□ -0.36
RER1-209ENST00000605895 GALMQ96C23 342 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 OR8B2Q96RD0 313 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 ZNF891A8MT65 544 aaPredicted RBP12.82□□□□□ -0.36
RER1-209ENST00000605895 GOSR1O95249 250 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 CER1O95813 267 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 HBZP02008 142 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 EFNB3Q15768 340 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 LHFPL4Q7Z7J7 247 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 WDR86Q86TI4 376 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 HSD17B10Q99714 261 aaKnown RBP12.82□□□□□ -0.36
RER1-209ENST00000605895 KCNIP1Q9NZI2 227 aa12.82□□□□□ -0.36
RER1-209ENST00000605895 FAM90A26D6RGX4 464 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 K7EP13 123 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 SAP30O75446 220 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 MT-CO3P00414 261 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 KRTAP27-1Q3LI81 207 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 OCIAD2Q56VL3 154 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 ZNF497Q6ZNH5 498 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 ZNF645Q8N7E2 425 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 OR2T6Q8NHC8 308 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 ZNF355PQ9NSJ1 428 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 EPHA8P29322 1005 aaPredicted RBP12.81□□□□□ -0.36
RER1-209ENST00000605895 MFAP2P55001 183 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 B3GALT5-AS1P59052 145 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 SRSF7Q16629 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
RER1-209ENST00000605895 ZNF718Q3SXZ3 478 aa12.81□□□□□ -0.36
RER1-209ENST00000605895 SCCPDHQ8NBX0 429 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms