RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 A0A1B0GUT8 65 aa17.85■□□□□ 0.45
SH3D19-211ENST00000604030 B9A039 149 aa17.85■□□□□ 0.45
SH3D19-211ENST00000604030 STAG3L3P0CL85 134 aa17.85■□□□□ 0.45
SH3D19-211ENST00000604030 CIARTQ8N365 385 aaPredicted RBP17.85■□□□□ 0.45
SH3D19-211ENST00000604030 FAM89BQ8N5H3 189 aa17.85■□□□□ 0.45
SH3D19-211ENST00000604030 TTC9CQ8N5M4 171 aa17.85■□□□□ 0.45
SH3D19-211ENST00000604030 UBE2L6O14933 153 aa17.85■□□□□ 0.45
SH3D19-211ENST00000604030 PPP1R32Q7Z5V6 425 aa17.85■□□□□ 0.45
SH3D19-211ENST00000604030 COL11A2P13942 1736 aaPredicted RBP17.85■□□□□ 0.45
SH3D19-211ENST00000604030 CKAP5Q14008 2032 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 TRBV6-7A0A0A0MS04 114 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 C1QTNF9BB2RNN3 333 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 IGLV3-19P01714 112 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 LY6G6FQ5SQ64 297 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 RPP21Q9H633 154 aaKnown RBP17.84■□□□□ 0.45
SH3D19-211ENST00000604030 CCDC88CQ9P219 2028 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 CTSBP07858 339 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 RAX2Q96IS3 184 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 PRDM13Q9H4Q3 707 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 ZNF703Q9H7S9 590 aaPredicted RBP17.84■□□□□ 0.45
SH3D19-211ENST00000604030 FOXD3Q9UJU5 478 aaPredicted RBP17.84■□□□□ 0.45
SH3D19-211ENST00000604030 C7orf71A4D174 169 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 TTC32Q5I0X7 151 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 RTN4RL2Q86UN3 420 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 COL4A5P29400 1685 aa17.84■□□□□ 0.45
SH3D19-211ENST00000604030 CDCP2Q5VXM1 449 aa17.83■□□□□ 0.45
SH3D19-211ENST00000604030 NDUFAF3Q9BU61 184 aa17.83■□□□□ 0.45
SH3D19-211ENST00000604030 PCP4P48539 62 aa17.83■□□□□ 0.44
SH3D19-211ENST00000604030 PRELID3AQ96N28 172 aa17.83■□□□□ 0.44
SH3D19-211ENST00000604030 TIMP4Q99727 224 aa17.83■□□□□ 0.44
SH3D19-211ENST00000604030 KNTC1P50748 2209 aa17.83■□□□□ 0.44
SH3D19-211ENST00000604030 TRIP12Q14669 1992 aaPredicted RBP17.83■□□□□ 0.44
SH3D19-211ENST00000604030 TRBV20OR9-2A0A075B6H5 130 aa17.83■□□□□ 0.44
SH3D19-211ENST00000604030 GPX1P07203 203 aa17.83■□□□□ 0.44
SH3D19-211ENST00000604030 MBNL2Q5VZF2 373 aaKnown RBP17.83■□□□□ 0.44
SH3D19-211ENST00000604030 NR2C2APQ86WQ0 139 aa17.83■□□□□ 0.44
SH3D19-211ENST00000604030 SLC25A28Q96A46 364 aa17.83■□□□□ 0.44
SH3D19-211ENST00000604030 TMEM242Q9NWH2 141 aa17.83■□□□□ 0.44
SH3D19-211ENST00000604030 C19orf67A6NJJ6 358 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 FAM90A9PA6NNJ1 464 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 SNRPCP09234 159 aaKnown RBP17.82■□□□□ 0.44
SH3D19-211ENST00000604030 RPL23P62829 140 aaKnown RBP17.82■□□□□ 0.44
SH3D19-211ENST00000604030 SRSF7Q16629 238 aaKnown RBP eCLIP17.82■□□□□ 0.44
SH3D19-211ENST00000604030 SSBP3Q9BWW4 388 aaPredicted RBP17.82■□□□□ 0.44
SH3D19-211ENST00000604030 MRPL13Q9BYD1 178 aaKnown RBP17.82■□□□□ 0.44
SH3D19-211ENST00000604030 IMMP2LQ96T52 175 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 FOXJ2Q9P0K8 574 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 IGHV1-69-2A0A0G2JMI3 117 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 H7C1H1 209 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 FTH1P19P0C7X4 201 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 SCGB1A1P11684 91 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 ICAM4Q14773 271 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 PRR7Q8TB68 274 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 SEC16AO15027 2179 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 IGLV3-32A0A0A0MS00 114 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 TMEM144Q7Z5S9 345 aa17.82■□□□□ 0.44
SH3D19-211ENST00000604030 LOC105371242A0A075B767 164 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 CCL20P78556 96 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 ATRAIDQ6UW56 229 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 RTN4RQ9BZR6 473 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 PARP14Q460N5 1801 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 UBE2CO00762 179 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 CGAP01215 116 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 GFRA1P56159 465 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 PRSS8Q16651 343 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 ZNF324BQ6AW86 544 aaPredicted RBP17.81■□□□□ 0.44
SH3D19-211ENST00000604030 GREB1LQ9C091 1923 aaPredicted RBP17.81■□□□□ 0.44
SH3D19-211ENST00000604030 IGKV1D-43A0A0B4J1Z2 117 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 LYPD3O95274 346 aa17.81■□□□□ 0.44
SH3D19-211ENST00000604030 KBTBD11-OT1A0A1B0GTJ5 212 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 TFF3Q07654 80 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 STPG1Q5TH74 334 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 SAMD13Q5VXD3 122 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 VKORC1L1Q8N0U8 176 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 IQCF6A8MYZ5 107 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 ZNF883P0CG24 379 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 OTX1P32242 354 aaPredicted RBP17.8■□□□□ 0.44
SH3D19-211ENST00000604030 MOB4Q9Y3A3 225 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 C17orf98A8MV24 154 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 NKX2-8O15522 239 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 AICDAQ9GZX7 198 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 OSTCQ9NRP0 149 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 A0A1B0GW64 132 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 SCO2A0A1W2PP80 73 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 PRSS2P07478 247 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 TEX45Q8NA69 505 aa17.8■□□□□ 0.44
SH3D19-211ENST00000604030 A0A1B0GV72 72 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 EGR1P18146 543 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 RRN3P1Q2M238 152 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 NIT1Q86X76 327 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 NEUROG3Q9Y4Z2 214 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 IGFBP2P18065 325 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 ID3Q02535 119 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 OR52E5Q8NH55 327 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 IGLV3-12A0A075B6K2 115 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 RPL39P5Q59GN2 51 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 MBD3L1Q8WWY6 194 aa17.79■□□□□ 0.44
SH3D19-211ENST00000604030 COL11A1P12107 1806 aaPredicted RBP17.79■□□□□ 0.44
SH3D19-211ENST00000604030 RNFT1Q5M7Z0 435 aa17.78■□□□□ 0.44
SH3D19-211ENST00000604030 SNRPD3P62318 126 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms