RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 GATA2P23769 480 aaPredicted RBP15.23■□□□□ 0.03
UPF1-210ENST00000600689 GNG10P50151 68 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 RANP62826 216 aaKnown RBP15.23■□□□□ 0.03
UPF1-210ENST00000600689 PAFAH1B2P68402 229 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 OR2M7Q8NG81 312 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 PKIBQ9C010 78 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 ZNF586Q9NXT0 402 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 IL36BQ9NZH7 164 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 NPIPB11E5RHQ5 1161 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 PQLC2Q6ZP29 291 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 SLC25A40Q8TBP6 338 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 NRN1Q9NPD7 142 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 MBNL3Q9NUK0 354 aaKnown RBP15.23■□□□□ 0.03
UPF1-210ENST00000600689 BOKQ9UMX3 212 aaPredicted RBP15.23■□□□□ 0.03
UPF1-210ENST00000600689 IL6RP08887 468 aaPredicted RBP15.23■□□□□ 0.03
UPF1-210ENST00000600689 CRYBB3P26998 211 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 COMPP49747 757 aaPredicted RBP15.23■□□□□ 0.03
UPF1-210ENST00000600689 CLDN18P56856 261 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 YPEL3P61236 119 aaPredicted RBP15.23■□□□□ 0.03
UPF1-210ENST00000600689 RPL39P5Q59GN2 51 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 COL5A1-AS1Q5SY13 56 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 FAM216AQ8WUB2 273 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 ZPBPQ9BS86 351 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 GNG12Q9UBI6 72 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 POLDIP2Q9Y2S7 368 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 WIPI2Q9Y4P8 454 aa15.23■□□□□ 0.03
UPF1-210ENST00000600689 M0R1X1 148 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 OR10J4P0C629 311 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 GCNT2Q8N0V5 402 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 GGTLC1Q9BX51 225 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 DEFB127Q9H1M4 99 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 RP1L1Q8IWN7 2480 aaPredicted RBP15.22■□□□□ 0.03
UPF1-210ENST00000600689 RAB29O14966 203 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 LYZL6O75951 148 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 CD99P14209 185 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 SRIP30626 198 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 RPEL1Q2QD12 228 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 ATP1A1-AS1Q5TC04 95 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 ABHD17BQ5VST6 288 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 TP73-AS1Q9UF72 201 aa15.22■□□□□ 0.03
UPF1-210ENST00000600689 A8MXE2 369 aa15.21■□□□□ 0.03
UPF1-210ENST00000600689 GCHFRP30047 84 aa15.21■□□□□ 0.03
UPF1-210ENST00000600689 HNRNPA3P51991 378 aaKnown RBP15.21■□□□□ 0.03
UPF1-210ENST00000600689 FOXF2Q12947 444 aa15.21■□□□□ 0.03
UPF1-210ENST00000600689 TMEM45BQ96B21 275 aa15.21■□□□□ 0.03
UPF1-210ENST00000600689 COQ2Q96H96 371 aa15.21■□□□□ 0.03
UPF1-210ENST00000600689 SSBP3Q9BWW4 388 aaPredicted RBP15.21■□□□□ 0.03
UPF1-210ENST00000600689 ARFGEF3Q5TH69 2177 aa15.21■□□□□ 0.03
UPF1-210ENST00000600689 CXorf1O96002 111 aa15.21■□□□□ 0.03
UPF1-210ENST00000600689 OR5G3P0C626 314 aa15.21■□□□□ 0.03
UPF1-210ENST00000600689 P0C879 139 aa15.21■□□□□ 0.03
UPF1-210ENST00000600689 OR1C1Q15619 314 aa15.21■□□□□ 0.03
UPF1-210ENST00000600689 GPR12P47775 334 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 UNQ5815/PRO19632Q6UWF5 114 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 MOB3BQ86TA1 216 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 CADP27708 2225 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 PCNX2A6NKB5 2137 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 AHRRA9YTQ3 701 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 STAG3L2P0CL84 134 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 STAG3L3P0CL85 134 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 MPV17P39210 176 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 PTTG1IPP53801 180 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 PSG5Q15238 335 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 CENPWQ5EE01 88 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 MIR17HGQ75NE6 70 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 SLC35E1Q96K37 410 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 GPX1P07203 203 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 FABP6P51161 128 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 PLA2G2CQ5R387 149 aa15.2■□□□□ 0.02
UPF1-210ENST00000600689 EAF1Q96JC9 268 aaPredicted RBP15.2■□□□□ 0.02
UPF1-210ENST00000600689 HSD17B10Q99714 261 aaKnown RBP15.2■□□□□ 0.02
UPF1-210ENST00000600689 TNCP24821 2201 aa15.19■□□□□ 0.02
UPF1-210ENST00000600689 AGFG2O95081 481 aa15.19■□□□□ 0.02
UPF1-210ENST00000600689 LGALS4P56470 323 aa15.19■□□□□ 0.02
UPF1-210ENST00000600689 TMEM164Q5U3C3 297 aa15.19■□□□□ 0.02
UPF1-210ENST00000600689 TAAR6Q96RI8 345 aa15.19■□□□□ 0.02
UPF1-210ENST00000600689 FAM173AQ9BQD7 235 aa15.19■□□□□ 0.02
UPF1-210ENST00000600689 TTTY12Q9BZ98 90 aa15.19■□□□□ 0.02
UPF1-210ENST00000600689 SS18L1O75177 396 aaPredicted RBP15.19■□□□□ 0.02
UPF1-210ENST00000600689 RNF151Q2KHN1 245 aa15.19■□□□□ 0.02
UPF1-210ENST00000600689 STPG3Q8N7X2 389 aa15.19■□□□□ 0.02
UPF1-210ENST00000600689 GNG4P50150 75 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 SELENOTP62341 195 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 ARG2P78540 354 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 EFNB3Q15768 340 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 TBC1D28Q2M2D7 210 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 UTF1Q5T230 341 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 ST6GALNAC6Q969X2 333 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 LINC00470Q9BZP3 86 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 CACNA1HO95180 2353 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 IGKV3D-15A0A087WSY6 115 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 OOEPA6NGQ2 149 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 OR7C2O60412 319 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 ERVK11-1P61568 191 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 TMEM251Q8N6I4 163 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 EP300Q09472 2414 aaPredicted RBP15.18■□□□□ 0.02
UPF1-210ENST00000600689 HCFC1P51610 2035 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 TNFSF15O95150 251 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 IGFBP2P18065 325 aa15.18■□□□□ 0.02
UPF1-210ENST00000600689 VWC2Q2TAL6 325 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms