RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 H2AFB2P0C5Z0 115 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 OR9G9P0C7N8 305 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 IGHV4-30-4P0DP06 118 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 SYNJ2BPP57105 145 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 TAS2R19P59542 299 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 SSBP2P81877 361 aaPredicted RBP8.76□□□□□ -1.01
HIF3A-217ENST00000600236 CD300CQ08708 224 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 PJVKQ0ZLH3 352 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 KLF5Q13887 457 aaPredicted RBP8.76□□□□□ -1.01
HIF3A-217ENST00000600236 PRSS8Q16651 343 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 FAM209BQ5JX69 171 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 LCN12Q6JVE5 192 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 ZNF343Q6P1L6 599 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 HAPLN4Q86UW8 402 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 ZNF645Q8N7E2 425 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 OR4C16Q8NGL9 310 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 SRSF12Q8WXF0 261 aaKnown RBP8.76□□□□□ -1.01
HIF3A-217ENST00000600236 SNAPC3Q92966 411 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 ST6GAL2Q96JF0 529 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 SPIN2AQ99865 258 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 SPIN2BQ9BPZ2 258 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 C20orf85Q9H1P6 137 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 PEMTQ9UBM1 199 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 PRELID3BQ9Y3B1 194 aa8.76□□□□□ -1.01
HIF3A-217ENST00000600236 TMEM235A6NFC5 223 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 FAM223BA6NKX1 122 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 SRRM4A7MD48 611 aaKnown RBP8.75□□□□□ -1.01
HIF3A-217ENST00000600236 TUSC2O75896 110 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 CCNKO75909 580 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 NAT1P18440 290 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 CCR6P51684 374 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 RRAS2P62070 204 aaPredicted RBP8.75□□□□□ -1.01
HIF3A-217ENST00000600236 CDK10Q15131 360 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 CDNFQ49AH0 187 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 STEAP1BQ6NZ63 245 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 KCTD9Q7L273 389 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 FAM223AQ8IWN6 122 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 MMD2Q8IY49 270 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 DDB2Q92466 427 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 C5orf30Q96GV9 206 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 ST6GALNAC5Q9BVH7 336 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 SLC2A8Q9NY64 477 aa8.75□□□□□ -1.01
HIF3A-217ENST00000600236 FCGR3BO75015 233 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 OR2A4O95047 310 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 IL5P05113 134 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 APELAP0DMC3 54 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 LYL1P12980 280 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 CBX5P45973 191 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 GNG2P59768 71 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 RHOGP84095 191 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 ATP5G2Q06055 141 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 MEF2DQ14814 521 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 RBMS2Q15434 407 aaKnown RBP8.74□□□□□ -1.01
HIF3A-217ENST00000600236 CASC10Q5T4H9 136 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 SLC25A42Q86VD7 318 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 TCTE3Q8IZS6 198 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 ADAD2Q8NCV1 583 aaKnown RBP8.74□□□□□ -1.01
HIF3A-217ENST00000600236 OR2K2Q8NGT1 345 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 VSTM2AQ8TAG5 236 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 SPATA25Q9BR10 227 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 TM2D3Q9BRN9 247 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 SIGLEC8Q9NYZ4 499 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 OR2W1Q9Y3N9 320 aa8.74□□□□□ -1.01
HIF3A-217ENST00000600236 TRAV6A0A075B6T7 132 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 LINC00473A8K010 186 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 SSX5O60225 188 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 RAB3DO95716 219 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 CD3DP04234 171 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 SAA1P0DJI8 122 aaPredicted RBP8.73□□□□□ -1.01
HIF3A-217ENST00000600236 EIF2B2P49770 351 aaKnown RBP8.73□□□□□ -1.01
HIF3A-217ENST00000600236 DEFA5Q01523 94 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 EXOSC2Q13868 293 aaKnown RBP8.73□□□□□ -1.01
HIF3A-217ENST00000600236 IDO2Q6ZQW0 420 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 Q8N1Y9 231 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 OR4S2Q8NH73 311 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 GIMAP1Q8WWP7 306 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 CITED4Q96RK1 184 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 HSD17B10Q99714 261 aaKnown RBP8.73□□□□□ -1.01
HIF3A-217ENST00000600236 TUBA4BQ9H853 241 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 ZNF430Q9H8G1 570 aaPredicted RBP8.73□□□□□ -1.01
HIF3A-217ENST00000600236 C19orf73Q9NVV2 129 aa8.73□□□□□ -1.01
HIF3A-217ENST00000600236 IGKV1D-8A0A087WSZ0 117 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 IFNA6P05013 189 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 ZNF735P0CB33 412 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 NFYAP23511 347 aaPredicted RBP8.72□□□□□ -1.01
HIF3A-217ENST00000600236 FAAP20Q6NZ36 180 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 TTC9CQ8N5M4 171 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 NECAP1Q8NC96 275 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 NUDCD2Q8WVJ2 157 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 TCTEX1D2Q8WW35 142 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 SLC25A21Q9BQT8 299 aaPredicted RBP8.72□□□□□ -1.01
HIF3A-217ENST00000600236 MCUBQ9NWR8 336 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 ANXA10Q9UJ72 324 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 ELF5Q9UKW6 265 aaPredicted RBP8.72□□□□□ -1.01
HIF3A-217ENST00000600236 ZNF257Q9Y2Q1 563 aa8.72□□□□□ -1.01
HIF3A-217ENST00000600236 KMT2CQ8NEZ4 4911 aaKnown RBP8.71□□□□□ -1.01
HIF3A-217ENST00000600236 TRBV9A0A0B4J1U6 114 aa8.71□□□□□ -1.02
HIF3A-217ENST00000600236 MEIS3P1A6NDR6 274 aa8.71□□□□□ -1.02
HIF3A-217ENST00000600236 SNRPGP15A8MWD9 76 aa8.71□□□□□ -1.02
HIF3A-217ENST00000600236 DISC1C4P0D8 188 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms