RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 HIST1H1BP16401 226 aaKnown RBP11.19□□□□□ -0.62
XRCC1-208ENST00000598422 F2RP25116 425 aa11.19□□□□□ -0.62
XRCC1-208ENST00000598422 PSMB6P28072 239 aa11.19□□□□□ -0.62
XRCC1-208ENST00000598422 POU2AF1Q16633 256 aa11.19□□□□□ -0.62
XRCC1-208ENST00000598422 PHLDA2Q53GA4 152 aa11.19□□□□□ -0.62
XRCC1-208ENST00000598422 RNASE12Q5GAN4 147 aaKnown RBP11.19□□□□□ -0.62
XRCC1-208ENST00000598422 LPCAT3Q6P1A2 487 aa11.19□□□□□ -0.62
XRCC1-208ENST00000598422 C19orf35Q6ZS72 473 aa11.19□□□□□ -0.62
XRCC1-208ENST00000598422 DGCR14Q96DF8 476 aaKnown RBP11.19□□□□□ -0.62
XRCC1-208ENST00000598422 PEMTQ9UBM1 199 aa11.19□□□□□ -0.62
XRCC1-208ENST00000598422 EXTL2Q9UBQ6 330 aa11.19□□□□□ -0.62
XRCC1-208ENST00000598422 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.18□□□□□ -0.62
XRCC1-208ENST00000598422 MARCH11A6NNE9 402 aa11.18□□□□□ -0.62
XRCC1-208ENST00000598422 E7EUB6 86 aa11.18□□□□□ -0.62
XRCC1-208ENST00000598422 H0Y980 276 aa11.18□□□□□ -0.62
XRCC1-208ENST00000598422 BMPR1BO00238 502 aa11.18□□□□□ -0.62
XRCC1-208ENST00000598422 CYB5BO43169 146 aa11.18□□□□□ -0.62
XRCC1-208ENST00000598422 IGLV1-51P01701 117 aa11.18□□□□□ -0.62
XRCC1-208ENST00000598422 REG1AP05451 166 aa11.18□□□□□ -0.62
XRCC1-208ENST00000598422 OR2B8PP59922 312 aa11.18□□□□□ -0.62
XRCC1-208ENST00000598422 LYSMD2Q8IV50 215 aa11.18□□□□□ -0.62
XRCC1-208ENST00000598422 ASCL2Q99929 193 aa11.18□□□□□ -0.62
XRCC1-208ENST00000598422 QTRT1Q9BXR0 403 aaKnown RBP11.18□□□□□ -0.62
XRCC1-208ENST00000598422 TRAV3A0A0B4J244 114 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 A0A1B0GW64 132 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 SNAPC5O75971 98 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 KRASP01116 189 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 IFNA6P05013 189 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 CRYGCP07315 174 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 FGF2P09038 288 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 CTRB1P17538 263 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 LPAR6P43657 344 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 CTRB2Q6GPI1 263 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 THOC7Q6I9Y2 204 aaKnown RBP11.17□□□□□ -0.62
XRCC1-208ENST00000598422 SLC38A6Q8IZM9 456 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 C15orf40Q8WUR7 153 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 FCAMRQ8WWV6 532 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 EEF1AKMT3Q96AZ1 226 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 SRSF8Q9BRL6 282 aaKnown RBP11.17□□□□□ -0.62
XRCC1-208ENST00000598422 U3KQK5 164 aa11.17□□□□□ -0.62
XRCC1-208ENST00000598422 PPP5D1E7EU14 171 aa11.16□□□□□ -0.62
XRCC1-208ENST00000598422 M0QYG6 137 aa11.16□□□□□ -0.62
XRCC1-208ENST00000598422 RGS5O15539 181 aa11.16□□□□□ -0.62
XRCC1-208ENST00000598422 NOL3O60936 208 aaKnown RBP11.16□□□□□ -0.62
XRCC1-208ENST00000598422 GGCTO75223 188 aaKnown RBP11.16□□□□□ -0.62
XRCC1-208ENST00000598422 IGHV3-23P01764 117 aa11.16□□□□□ -0.62
XRCC1-208ENST00000598422 PGAM2P15259 253 aa11.16□□□□□ -0.62
XRCC1-208ENST00000598422 ALDH3B2P48448 385 aa11.16□□□□□ -0.62
XRCC1-208ENST00000598422 RNASE10Q5GAN6 216 aaKnown RBP11.16□□□□□ -0.62
XRCC1-208ENST00000598422 LCN12Q6JVE5 192 aa11.16□□□□□ -0.62
XRCC1-208ENST00000598422 DYNLRB2Q8TF09 96 aa11.16□□□□□ -0.62
XRCC1-208ENST00000598422 FANCD2OSQ96PS1 177 aa11.16□□□□□ -0.62
XRCC1-208ENST00000598422 HINT2Q9BX68 163 aa11.16□□□□□ -0.62
XRCC1-208ENST00000598422 IGLC7A0M8Q6 106 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 NDUFB8O95169 186 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 CSN3P07498 182 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 G6PCP35575 357 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 ARL3P36405 182 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 CLEC19AQ6UXS0 136 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 HSD17B13Q7Z5P4 300 aaPredicted RBP11.15□□□□□ -0.62
XRCC1-208ENST00000598422 TBC1D26Q86UD7 250 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 GTSCR1Q86UQ5 136 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 CLVS1Q8IUQ0 354 aaPredicted RBP11.15□□□□□ -0.62
XRCC1-208ENST00000598422 SGPP2Q8IWX5 399 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 Q8N402 240 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 OR1L8Q8NGR8 309 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 OR52I2Q8NH67 350 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 CXorf58Q96LI9 332 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 WWC2-AS2Q96NR7 200 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 SIGLEC8Q9NYZ4 499 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 THYN1Q9P016 225 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 PRNDQ9UKY0 176 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 S4R3C0 116 aa11.15□□□□□ -0.62
XRCC1-208ENST00000598422 IGLV11-55A0A075B6I3 123 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 CGB1A6NKQ9 187 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 TPPPO94811 219 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 HLA-AP01891 365 aaKnown RBP11.14□□□□□ -0.63
XRCC1-208ENST00000598422 FRMD6-AS1P0C7T7 363 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 TRAPPC2P0DI81 140 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 TRAPPC2BP0DI82 140 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 OR13C7P0DN81 318 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 TBPP20226 339 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 UCP3P55916 312 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 IL34Q6ZMJ4 242 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 RAB2BQ8WUD1 216 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 CCDC140Q96MF4 163 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 TSC22D3Q99576 134 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 KLK11Q9UBX7 282 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 NSG2Q9Y328 171 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 OR51B2Q9Y5P1 312 aa11.14□□□□□ -0.63
XRCC1-208ENST00000598422 TRBV7-1A0A0A6YYK4 115 aa11.13□□□□□ -0.63
XRCC1-208ENST00000598422 OR2C1O95371 312 aa11.13□□□□□ -0.63
XRCC1-208ENST00000598422 SERPINE2P07093 398 aa11.13□□□□□ -0.63
XRCC1-208ENST00000598422 MECP2P51608 486 aaKnown RBP11.13□□□□□ -0.63
XRCC1-208ENST00000598422 SPCS2Q15005 226 aa11.13□□□□□ -0.63
XRCC1-208ENST00000598422 ZNF585BQ52M93 769 aa11.13□□□□□ -0.63
XRCC1-208ENST00000598422 ARRDC1Q8N5I2 433 aa11.13□□□□□ -0.63
XRCC1-208ENST00000598422 GDPD1Q8N9F7 314 aa11.13□□□□□ -0.63
XRCC1-208ENST00000598422 OR10W1Q8NGF6 305 aa11.13□□□□□ -0.63
XRCC1-208ENST00000598422 LSM10Q969L4 123 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms