RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TENM3Q9P273 2699 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 CGB1A6NKQ9 187 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 H0Y980 276 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 BMPR1BO00238 502 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 GPR31O00270 319 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 OR2J3O76001 311 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 CSN3P07498 182 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 AREGP15514 252 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 HIST1H1BP16401 226 aaKnown RBP8.02□□□□□ -1.13
CCDC9-203ENST00000596938 RCVRNP35243 200 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 ALDH3B2P48448 385 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 MECP2P51608 486 aaKnown RBP8.02□□□□□ -1.13
CCDC9-203ENST00000596938 EXOSC2Q13868 293 aaKnown RBP8.02□□□□□ -1.13
CCDC9-203ENST00000596938 GPR107Q5VW38 600 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 SNX29P2Q8IUI4 249 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 Q8N1Y9 231 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 RSRP1Q9BUV0 290 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 MRPS26Q9BYN8 205 aaKnown RBP8.02□□□□□ -1.13
CCDC9-203ENST00000596938 COMMD5Q9GZQ3 224 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 NAA50Q9GZZ1 169 aaKnown RBP8.02□□□□□ -1.13
CCDC9-203ENST00000596938 FAM212BQ9NTI7 297 aaPredicted RBP8.02□□□□□ -1.13
CCDC9-203ENST00000596938 PEMTQ9UBM1 199 aa8.02□□□□□ -1.13
CCDC9-203ENST00000596938 TRAV3A0A0B4J244 114 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 GGCTO75223 188 aaKnown RBP8.01□□□□□ -1.13
CCDC9-203ENST00000596938 S1PR2O95136 353 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 NDUFB8O95169 186 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 RLN1P04808 185 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 MYOD1P15172 320 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 LPAR6P43657 344 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 UCP3P55916 312 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 TSPAN5P62079 268 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 ZNF585BQ52M93 769 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 THOC7Q6I9Y2 204 aaKnown RBP8.01□□□□□ -1.13
CCDC9-203ENST00000596938 HSD17B13Q7Z5P4 300 aaPredicted RBP8.01□□□□□ -1.13
CCDC9-203ENST00000596938 DMBX1Q8NFW5 382 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 C15orf40Q8WUR7 153 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 FCAMRQ8WWV6 532 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 WWC2-AS2Q96NR7 200 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 TMEM140Q9NV12 185 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 U3KQK5 164 aa8.01□□□□□ -1.13
CCDC9-203ENST00000596938 IGLV11-55A0A075B6I3 123 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 TRBV7-1A0A0A6YYK4 115 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 TEX50A0A1B0GTY4 177 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 IGLC7A0M8Q6 106 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 MARCH11A6NNE9 402 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 A8MZ25 164 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 FAM25AB3EWG3 89 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 FAM25CB3EWG5 89 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 FAM25GB3EWG6 89 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 LGALS9O00182 355 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 DEFA4P12838 97 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 S100GP29377 79 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 ERVK-16P61578 105 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 C19orf35Q6ZS72 473 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 GPHB5Q86YW7 130 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 OR1L8Q8NGR8 309 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 OR2K2Q8NGT1 345 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 CXorf58Q96LI9 332 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 ASCL2Q99929 193 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 QTRT1Q9BXR0 403 aaKnown RBP8□□□□□ -1.13
CCDC9-203ENST00000596938 FXYD6Q9H0Q3 95 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 KLK11Q9UBX7 282 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 TNCP24821 2201 aa8□□□□□ -1.13
CCDC9-203ENST00000596938 KMT2CQ8NEZ4 4911 aaKnown RBP7.99□□□□□ -1.13
CCDC9-203ENST00000596938 CYB5BO43169 146 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 SNAPC5O75971 98 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 OR2C1O95371 312 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 KRASP01116 189 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 CLEC3BP05452 202 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 FRMD6-AS1P0C7T7 363 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 TRAPPC2P0DI81 140 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 TRAPPC2BP0DI82 140 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 TBPP20226 339 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 PTBP1P26599 531 aaKnown RBP eCLIP7.99□□□□□ -1.13
CCDC9-203ENST00000596938 LCN12Q6JVE5 192 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 CLEC19AQ6UXS0 136 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 ADAMTSL5Q6ZMM2 481 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 GPR141Q7Z602 305 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 HAPLN4Q86UW8 402 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 SBSPONQ8IVN8 264 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 SLC38A6Q8IZM9 456 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 Q8N402 240 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 EEF1AKMT3Q96AZ1 226 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 CCDC140Q96MF4 163 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 ABHD1Q96SE0 405 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 NDUFA4L2Q9NRX3 87 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 C19orf73Q9NVV2 129 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 FKBP11Q9NYL4 201 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 THYN1Q9P016 225 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 EXTL2Q9UBQ6 330 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 MTFP1Q9UDX5 166 aa7.99□□□□□ -1.13
CCDC9-203ENST00000596938 PPP5D1E7EU14 171 aa7.98□□□□□ -1.13
CCDC9-203ENST00000596938 IFNA6P05013 189 aa7.98□□□□□ -1.13
CCDC9-203ENST00000596938 REG1AP05451 166 aa7.98□□□□□ -1.13
CCDC9-203ENST00000596938 SERPINE2P07093 398 aa7.98□□□□□ -1.13
CCDC9-203ENST00000596938 RPA2P15927 270 aa7.98□□□□□ -1.13
CCDC9-203ENST00000596938 G6PCP35575 357 aa7.98□□□□□ -1.13
CCDC9-203ENST00000596938 FAM106AQ4KMX7 169 aa7.98□□□□□ -1.13
CCDC9-203ENST00000596938 PHLDA2Q53GA4 152 aa7.98□□□□□ -1.13
CCDC9-203ENST00000596938 TBC1D26Q86UD7 250 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms