RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 UPK2O00526 184 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 HPGDSO60760 199 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 GABARAPO95166 117 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 HLA-AP01891 365 aaKnown RBP9.9□□□□□ -0.82
LIG1-212ENST00000596549 NQO2P16083 231 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 PRSS3P35030 304 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 HRH1P35367 487 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 MECP2P51608 486 aaKnown RBP9.9□□□□□ -0.82
LIG1-212ENST00000596549 TAS2R46P59540 309 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 DHRS11Q6UWP2 260 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 LYSMD2Q8IV50 215 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 OR5H2Q8NGV7 314 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 RCHY1Q96PM5 261 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 PLEKHA2Q9HB19 425 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 HRASLSQ9HDD0 168 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 C19orf73Q9NVV2 129 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 COMMD9Q9P000 198 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 DPPA5A6NC42 116 aa9.89□□□□□ -0.83
LIG1-212ENST00000596549 PGLYRP1O75594 196 aaPredicted RBP9.89□□□□□ -0.83
LIG1-212ENST00000596549 APOA1P02647 267 aa9.89□□□□□ -0.83
LIG1-212ENST00000596549 RPA2P15927 270 aa9.89□□□□□ -0.83
LIG1-212ENST00000596549 ELK1P19419 428 aa9.89□□□□□ -0.83
LIG1-212ENST00000596549 HLA-DMAP28067 261 aa9.89□□□□□ -0.83
LIG1-212ENST00000596549 CTF1Q16619 201 aa9.89□□□□□ -0.83
LIG1-212ENST00000596549 SNX29P2Q8IUI4 249 aa9.89□□□□□ -0.83
LIG1-212ENST00000596549 PEMTQ9UBM1 199 aa9.89□□□□□ -0.83
LIG1-212ENST00000596549 STAB2Q8WWQ8 2551 aa9.89□□□□□ -0.83
LIG1-212ENST00000596549 MARCH11A6NNE9 402 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 A8MZ25 164 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 FGF2P09038 288 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 F2RP25116 425 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 TATDN3Q17R31 274 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 ZNF585BQ52M93 769 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 LCN12Q6JVE5 192 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 CLEC19AQ6UXS0 136 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 Q8N402 240 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 DMBX1Q8NFW5 382 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 OR10W1Q8NGF6 305 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 FCAMRQ8WWV6 532 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 BORCS5Q969J3 196 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 CMTM3Q96MX0 182 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 TM2D3Q9BRN9 247 aa9.88□□□□□ -0.83
LIG1-212ENST00000596549 RYR3Q15413 4870 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 C2orf70A6NJV1 201 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 H0Y980 276 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 GPR31O00270 319 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 GGCTO75223 188 aaKnown RBP9.87□□□□□ -0.83
LIG1-212ENST00000596549 ARL3P36405 182 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 CD300EQ496F6 205 aaPredicted RBP9.87□□□□□ -0.83
LIG1-212ENST00000596549 PHLDA2Q53GA4 152 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 FAM209BQ5JX69 171 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 SGPP2Q8IWX5 399 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 CD300LFQ8TDQ1 290 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 CACNG8Q8WXS5 425 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 AIFM2Q9BRQ8 373 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 SCPEP1Q9HB40 452 aa9.87□□□□□ -0.83
LIG1-212ENST00000596549 TMEM213A2RRL7 107 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 DBX1A6NMT0 343 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 A8MWP6 167 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 LGALS9O00182 355 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 OR2C1O95371 312 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 DHFRP00374 187 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 HIST1H1BP16401 226 aaKnown RBP9.86□□□□□ -0.83
LIG1-212ENST00000596549 RCVRNP35243 200 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 G6PCP35575 357 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 WT1-ASQ06250 92 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 RNASE12Q5GAN4 147 aaKnown RBP9.86□□□□□ -0.83
LIG1-212ENST00000596549 OR2K2Q8NGT1 345 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 OR6F1Q8NGZ6 308 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 EEF1AKMT3Q96AZ1 226 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 DGCR14Q96DF8 476 aaKnown RBP9.86□□□□□ -0.83
LIG1-212ENST00000596549 SRSF8Q9BRL6 282 aaKnown RBP9.86□□□□□ -0.83
LIG1-212ENST00000596549 QTRT1Q9BXR0 403 aaKnown RBP9.86□□□□□ -0.83
LIG1-212ENST00000596549 COMMD5Q9GZQ3 224 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 ZC4H2Q9NQZ6 224 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 NSG2Q9Y328 171 aa9.86□□□□□ -0.83
LIG1-212ENST00000596549 TEX50A0A1B0GTY4 177 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 M0QYG6 137 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 DEFA4P12838 97 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 LPAR6P43657 344 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 RORCP51449 518 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 MFAP2P55001 183 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 ERVK-16P61578 105 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 GPR107Q5VW38 600 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 THOC7Q6I9Y2 204 aaKnown RBP9.85□□□□□ -0.83
LIG1-212ENST00000596549 UNQ9165/PRO28630Q6UXU0 137 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 GTSCR1Q86UQ5 136 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 GDPD1Q8N9F7 314 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 ZNF502Q8TBZ5 544 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 DYNLRB2Q8TF09 96 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 WFDC10AQ9H1F0 79 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 SELENOKQ9Y6D0 94 aa9.85□□□□□ -0.83
LIG1-212ENST00000596549 ZNF785A8K8V0 405 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 KRASP01116 189 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 IGKV1-39P01597 117 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 IGKV1D-39P04432 117 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 CD7P09564 240 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 FOLR2P14207 255 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 GPR183P32249 361 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 ALDH3B2P48448 385 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms