RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 OR2A7Q96R45 310 aa14□□□□□ -0.17
VAT1-208ENST00000590924 TP53RKQ96S44 253 aa14□□□□□ -0.17
VAT1-208ENST00000590924 OR51J1Q9H342 316 aa14□□□□□ -0.17
VAT1-208ENST00000590924 PIGBOS1A0A0B4J2F0 54 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 S1PR2O95136 353 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 IGHG4P01861 327 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 MAS1LP35410 378 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 ERVK-16P61578 105 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 CX3CL1P78423 397 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 IFITM3Q01628 133 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 PRSS8Q16651 343 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 SLC25A42Q86VD7 318 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 MMD2Q8IY49 270 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 CENPSQ8N2Z9 138 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 ADAD2Q8NCV1 583 aaKnown RBP13.99□□□□□ -0.17
VAT1-208ENST00000590924 TMEM230Q96A57 120 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 TSC22D3Q99576 134 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 HSPB9Q9BQS6 159 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 TMEM222Q9H0R3 208 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 TBC1D24Q9ULP9 559 aa13.99□□□□□ -0.17
VAT1-208ENST00000590924 MARCH11A6NNE9 402 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 KBTBD11O94819 623 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 CDS2O95674 445 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 AKR1C4P17516 323 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 CRIP2P52943 208 aaPredicted RBP13.98□□□□□ -0.17
VAT1-208ENST00000590924 DEFA1P59665 94 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 DEFA3P59666 94 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 MRGPRG-AS1Q2M3A8 158 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 DEFB136Q30KP8 78 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 OR4A47Q6IF82 309 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 LCNL1Q6ZST4 164 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 DMBX1Q8NFW5 382 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 GLYATL2Q8WU03 294 aa13.98□□□□□ -0.17
VAT1-208ENST00000590924 CA2P00918 260 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 KRASP01116 189 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 OR5AC1P0C628 307 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 ANXA3P12429 323 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 VDAC1P21796 283 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 RAB25P57735 213 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 TMEM267Q0VDI3 215 aaPredicted RBP13.97□□□□□ -0.17
VAT1-208ENST00000590924 SP6Q3SY56 376 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 TMED4Q7Z7H5 227 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 VKORC1L1Q8N0U8 176 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 OR5M8Q8NGP6 311 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 IL22RA2Q969J5 263 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 SEC22AQ96IW7 307 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 CLCC1Q96S66 551 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 ALX4Q9H161 411 aaPredicted RBP13.97□□□□□ -0.17
VAT1-208ENST00000590924 ZNF430Q9H8G1 570 aaPredicted RBP13.97□□□□□ -0.17
VAT1-208ENST00000590924 TPSG1Q9NRR2 321 aa13.97□□□□□ -0.17
VAT1-208ENST00000590924 FAM240BA0A1B0GVZ2 78 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 UPK2O00526 184 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 ACTL6BO94805 426 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 IGKV1-39P01597 117 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 IGKV1D-39P04432 117 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 TCRBP04435 133 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 PSMB8P28062 276 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 SUPT4H1P63272 117 aaKnown RBP13.96□□□□□ -0.17
VAT1-208ENST00000590924 PJVKQ0ZLH3 352 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 FXYD3Q14802 87 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 TRIM16LQ309B1 348 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 SSX9Q7RTT3 188 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 C4orf3Q8WVX3 66 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 TMEM68Q96MH6 324 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 TMEM56Q96MV1 263 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 TMEM140Q9NV12 185 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 NUBP2Q9Y5Y2 271 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 TMEM56-RWDD3S4R434 201 aa13.96□□□□□ -0.17
VAT1-208ENST00000590924 CNIH1O95406 144 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 G6PCP35575 357 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 RPL8P62917 257 aaKnown RBP13.95□□□□□ -0.18
VAT1-208ENST00000590924 SRPXP78539 464 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 FHL3Q13643 280 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 TMEM187Q14656 261 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 AKIRIN2Q53H80 203 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 C9orf66Q5T8R8 295 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 DUSP18Q8NEJ0 188 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 MYOZ3Q8TDC0 251 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 ARPC1AQ92747 370 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 PALMDQ9NP74 551 aa13.95□□□□□ -0.18
VAT1-208ENST00000590924 ARPC1BO15143 372 aaKnown RBP13.94□□□□□ -0.18
VAT1-208ENST00000590924 ATP6V0E1O15342 81 aa13.94□□□□□ -0.18
VAT1-208ENST00000590924 EGR2P11161 476 aaPredicted RBP13.94□□□□□ -0.18
VAT1-208ENST00000590924 SSBP2P81877 361 aaPredicted RBP13.94□□□□□ -0.18
VAT1-208ENST00000590924 H2BFWTQ7Z2G1 175 aa13.94□□□□□ -0.18
VAT1-208ENST00000590924 FAM219AQ8IW50 185 aa13.94□□□□□ -0.18
VAT1-208ENST00000590924 RBPMSQ93062 196 aaKnown RBP13.94□□□□□ -0.18
VAT1-208ENST00000590924 WWC2-AS2Q96NR7 200 aa13.94□□□□□ -0.18
VAT1-208ENST00000590924 PARP11Q9NR21 331 aa13.94□□□□□ -0.18
VAT1-208ENST00000590924 FKBP11Q9NYL4 201 aa13.94□□□□□ -0.18
VAT1-208ENST00000590924 FLVCR2Q9UPI3 526 aa13.94□□□□□ -0.18
VAT1-208ENST00000590924 KMT2CQ8NEZ4 4911 aaKnown RBP13.93□□□□□ -0.18
VAT1-208ENST00000590924 SNAPC5O75971 98 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 SFT2D2O95562 160 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 HLA-GP17693 338 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 MECP2P51608 486 aaKnown RBP13.93□□□□□ -0.18
VAT1-208ENST00000590924 NDPQ00604 133 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 TNXAQ16473 311 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 SELENOHQ8IZQ5 122 aaKnown RBP13.93□□□□□ -0.18
VAT1-208ENST00000590924 LGI3Q8N145 548 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms